RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SLURP1P55000 103 aa15.09■□□□□ 0.01
CBWD3-201ENST00000360171 SAMD13Q5VXD3 122 aa15.09■□□□□ 0.01
CBWD3-201ENST00000360171 LINC00315P59091 139 aa15.09■□□□□ 0.01
CBWD3-201ENST00000360171 PAPPA-AS1Q5QFB9 102 aa15.09■□□□□ 0.01
CBWD3-201ENST00000360171 PRADC1Q9BSG0 188 aa15.09■□□□□ 0.01
CBWD3-201ENST00000360171 LGALS9O00182 355 aa15.08■□□□□ 0.01
CBWD3-201ENST00000360171 GNRH2O43555 120 aa15.08■□□□□ 0.01
CBWD3-201ENST00000360171 CYSLTR1Q9Y271 337 aa15.08■□□□□ 0.01
CBWD3-201ENST00000360171 SPANXB1Q9NS25 103 aaPredicted RBP15.08■□□□□ 0
CBWD3-201ENST00000360171 MUC4Q99102 2169 aa15.08■□□□□ 0
CBWD3-201ENST00000360171 TMEM238LA0A1B0GVL6 79 aa15.07■□□□□ 0
CBWD3-201ENST00000360171 A6NJY4 79 aa15.07■□□□□ 0
CBWD3-201ENST00000360171 J3QR89 54 aa15.07■□□□□ 0
CBWD3-201ENST00000360171 SPRY2O43597 315 aa15.07■□□□□ 0
CBWD3-201ENST00000360171 DEFB1P60022 68 aa15.07■□□□□ 0
CBWD3-201ENST00000360171 F6UB75 175 aa15.06■□□□□ 0
CBWD3-201ENST00000360171 POLR2KP53803 58 aaKnown RBP15.06■□□□□ 0
CBWD3-201ENST00000360171 RPL11P62913 178 aaKnown RBP15.06■□□□□ 0
CBWD3-201ENST00000360171 PROK1P58294 105 aa15.05■□□□□ 0
CBWD3-201ENST00000360171 CITED2Q99967 270 aaPredicted RBP15.05■□□□□ 0
CBWD3-201ENST00000360171 A0A1W2PRX2 142 aa15.05■□□□□ -0
CBWD3-201ENST00000360171 TMEM238C9JI98 176 aa15.05■□□□□ -0
CBWD3-201ENST00000360171 CRYGDP07320 174 aa15.05■□□□□ -0
CBWD3-201ENST00000360171 IGKV3-7A0A075B6H7 116 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 ZNF815PA8K554 130 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 WFDC2Q14508 124 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 WFDC12Q8WWY7 111 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 TMEM141Q96I45 108 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 IGIPA6NJ69 53 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 H3BMG7 143 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 DUSP14O95147 198 aaKnown RBP15.04■□□□□ -0
CBWD3-201ENST00000360171 ID1P41134 155 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 MORN3Q6PF18 240 aaPredicted RBP15.04■□□□□ -0
CBWD3-201ENST00000360171 FAM159AQ6UWV7 190 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 TIMM17AQ99595 171 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 PRO0461Q9UI25 63 aa15.04■□□□□ -0
CBWD3-201ENST00000360171 C2CD3Q4AC94 2353 aa15.03■□□□□ -0
CBWD3-201ENST00000360171 GAGE13Q4V321 117 aa15.03■□□□□ -0
CBWD3-201ENST00000360171 RAX2Q96IS3 184 aa15.03■□□□□ -0
CBWD3-201ENST00000360171 VCYO14598 125 aa15.02■□□□□ -0
CBWD3-201ENST00000360171 UBE2D1P51668 147 aa15.02■□□□□ -0
CBWD3-201ENST00000360171 HERVK_113P61574 105 aa15.02■□□□□ -0
CBWD3-201ENST00000360171 ZFP2Q6ZN57 461 aa15.02■□□□□ -0
CBWD3-201ENST00000360171 ODF3Q96PU9 254 aa15.02■□□□□ -0
CBWD3-201ENST00000360171 IGLV4-69A0A075B6H9 119 aa15.02□□□□□ -0.01
CBWD3-201ENST00000360171 TRBV6-5A0A0K0K1A5 114 aa15.02□□□□□ -0.01
CBWD3-201ENST00000360171 TSHBP01222 138 aa15.02□□□□□ -0.01
CBWD3-201ENST00000360171 PMVKQ15126 192 aa15.02□□□□□ -0.01
CBWD3-201ENST00000360171 DLX4Q92988 240 aaPredicted RBP15.02□□□□□ -0.01
CBWD3-201ENST00000360171 TSSC4Q9Y5U2 329 aaPredicted RBP15.02□□□□□ -0.01
CBWD3-201ENST00000360171 TP53TG1Q9Y2A0 90 aa15.01□□□□□ -0.01
CBWD3-201ENST00000360171 SCGB1A1P11684 91 aa15.01□□□□□ -0.01
CBWD3-201ENST00000360171 SUMO4Q6EEV6 95 aa15.01□□□□□ -0.01
CBWD3-201ENST00000360171 DCANP1Q8TF63 244 aa15.01□□□□□ -0.01
CBWD3-201ENST00000360171 KIR2DL4Q99706 377 aa15.01□□□□□ -0.01
CBWD3-201ENST00000360171 C11orf86A6NJI1 115 aa15□□□□□ -0.01
CBWD3-201ENST00000360171 CD300EQ496F6 205 aaPredicted RBP15□□□□□ -0.01
CBWD3-201ENST00000360171 SCGB1D4Q6XE38 83 aa15□□□□□ -0.01
CBWD3-201ENST00000360171 TRBV27A0A0K0K1C4 114 aa15□□□□□ -0.01
CBWD3-201ENST00000360171 KRTAP10-3P60369 221 aa15□□□□□ -0.01
CBWD3-201ENST00000360171 FHL3Q13643 280 aa15□□□□□ -0.01
CBWD3-201ENST00000360171 WNK1Q9H4A3 2382 aa14.99□□□□□ -0.01
CBWD3-201ENST00000360171 AMTNQ6UX39 209 aa14.98□□□□□ -0.01
CBWD3-201ENST00000360171 PGPEP1Q9NXJ5 209 aa14.98□□□□□ -0.01
CBWD3-201ENST00000360171 ADARB2-AS1A8MUL3 147 aa14.98□□□□□ -0.01
CBWD3-201ENST00000360171 PLEKHB2Q96CS7 222 aa14.98□□□□□ -0.01
CBWD3-201ENST00000360171 SPATA25Q9BR10 227 aa14.98□□□□□ -0.01
CBWD3-201ENST00000360171 CCL24O00175 119 aa14.97□□□□□ -0.01
CBWD3-201ENST00000360171 SRSF9Q13242 221 aaKnown RBP eCLIP14.97□□□□□ -0.01
CBWD3-201ENST00000360171 ETDBQ3ZM63 59 aa14.97□□□□□ -0.01
CBWD3-201ENST00000360171 C9orf85Q96MD7 179 aa14.97□□□□□ -0.01
CBWD3-201ENST00000360171 NIPBLQ6KC79 2804 aaeCLIP14.97□□□□□ -0.01
CBWD3-201ENST00000360171 CD7P09564 240 aa14.97□□□□□ -0.01
CBWD3-201ENST00000360171 SIGMAR1Q99720 223 aa14.97□□□□□ -0.01
CBWD3-201ENST00000360171 MRPL16Q9NX20 251 aaKnown RBP14.97□□□□□ -0.01
CBWD3-201ENST00000360171 A0A0J9YY99 117 aa14.96□□□□□ -0.01
CBWD3-201ENST00000360171 SDHAF1A6NFY7 115 aa14.96□□□□□ -0.01
CBWD3-201ENST00000360171 PEMTQ9UBM1 199 aa14.96□□□□□ -0.01
CBWD3-201ENST00000360171 GAGE12HA6NDE8 117 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 ZNF876PQ49A33 203 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 LYRM7Q5U5X0 104 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 ATP6V0E2Q8NHE4 81 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 SPAG8Q99932 426 aaPredicted RBP14.95□□□□□ -0.02
CBWD3-201ENST00000360171 SH2D6Q7Z4S9 175 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 JPT2Q9H910 190 aa14.95□□□□□ -0.02
CBWD3-201ENST00000360171 IGHV3-16A0A0C4DH30 117 aa14.94□□□□□ -0.02
CBWD3-201ENST00000360171 UBE2D3P61077 147 aa14.94□□□□□ -0.02
CBWD3-201ENST00000360171 UBE2D2P62837 147 aa14.94□□□□□ -0.02
CBWD3-201ENST00000360171 RHOHQ15669 191 aa14.94□□□□□ -0.02
CBWD3-201ENST00000360171 TRAV12-3A0A0B4J271 114 aa14.93□□□□□ -0.02
CBWD3-201ENST00000360171 RPL39P62891 51 aaKnown RBP14.93□□□□□ -0.02
CBWD3-201ENST00000360171 NSUN5P1Q3KNT7 163 aa14.93□□□□□ -0.02
CBWD3-201ENST00000360171 CFAP126Q5VTH2 177 aa14.93□□□□□ -0.02
CBWD3-201ENST00000360171 SYT8Q8NBV8 401 aa14.93□□□□□ -0.02
CBWD3-201ENST00000360171 A0A087WWL8 130 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 F5H697 171 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 K7EQG2 157 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 TSPAN13O95857 204 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 NFE4Q86UQ8 179 aa14.92□□□□□ -0.02
CBWD3-201ENST00000360171 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms