RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 PLXNA4Q9HCM2 1894 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 Q8N7P7 452 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 PIP4P1Q86T03 277 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 SHANK1Q9Y566 2161 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 ESM1Q9NQ30 184 aa11.07□□□□□ -0.64
NUP98-203ENST00000359171 H0Y9J4 135 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 IGHV4-30-2A0A087WSY4 118 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 J3QKU1 62 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 MYCNOSP40205 109 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
NUP98-203ENST00000359171 SPTSSBQ8NFR3 76 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
NUP98-203ENST00000359171 ODF3Q96PU9 254 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
NUP98-203ENST00000359171 SBF1O95248 1867 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 P0DMU3 169 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
NUP98-203ENST00000359171 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
NUP98-203ENST00000359171 DEFB1P60022 68 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 HEATR5AQ86XA9 2040 aa11.05□□□□□ -0.64
NUP98-203ENST00000359171 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
NUP98-203ENST00000359171 WT1P19544 449 aaPredicted RBP11.04□□□□□ -0.64
NUP98-203ENST00000359171 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
NUP98-203ENST00000359171 ANK1P16157 1881 aa11.04□□□□□ -0.64
NUP98-203ENST00000359171 TRBV30A0A0K0K1B3 111 aa11.04□□□□□ -0.64
NUP98-203ENST00000359171 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
NUP98-203ENST00000359171 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
NUP98-203ENST00000359171 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
NUP98-203ENST00000359171 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
NUP98-203ENST00000359171 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
NUP98-203ENST00000359171 C4orf3Q8WVX3 66 aa11.03□□□□□ -0.64
NUP98-203ENST00000359171 C4orf48Q5BLP8 95 aa11.03□□□□□ -0.64
NUP98-203ENST00000359171 SIRPDQ9H106 197 aa11.02□□□□□ -0.64
NUP98-203ENST00000359171 MED13LQ71F56 2210 aa11.02□□□□□ -0.65
NUP98-203ENST00000359171 TMEM223A0PJW6 202 aa11.02□□□□□ -0.65
NUP98-203ENST00000359171 RBX1P62877 108 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 IGF2-ASQ6U949 168 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 IGKV4-1P06312 121 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 ATP5EP56381 51 aaPredicted RBP11.01□□□□□ -0.65
NUP98-203ENST00000359171 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 IBA57-AS1B1ANH7 110 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 LINC00574Q9H8X3 128 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 CDKN2A-AS1Q9UH64 79 aa11.01□□□□□ -0.65
NUP98-203ENST00000359171 H7C423 109 aa11□□□□□ -0.65
NUP98-203ENST00000359171 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
NUP98-203ENST00000359171 DEFB135Q30KP9 77 aa11□□□□□ -0.65
NUP98-203ENST00000359171 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
NUP98-203ENST00000359171 V9GYY9 64 aa11□□□□□ -0.65
NUP98-203ENST00000359171 VWA8A3KMH1 1905 aa11□□□□□ -0.65
NUP98-203ENST00000359171 USP17L23D6RBM5 183 aa11□□□□□ -0.65
NUP98-203ENST00000359171 SPRY4Q9C004 299 aa11□□□□□ -0.65
NUP98-203ENST00000359171 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 TRIAP1O43715 76 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 CCDC140Q96MF4 163 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 COL4A6Q14031 1691 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 THSD7BQ9C0I4 1608 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 NDUFC1O43677 76 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 DAZAP2Q15038 168 aaPredicted RBP10.99□□□□□ -0.65
NUP98-203ENST00000359171 LTBP1Q14766 1721 aa10.99□□□□□ -0.65
NUP98-203ENST00000359171 A6NDX4 124 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
NUP98-203ENST00000359171 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 INSL3P51460 131 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
NUP98-203ENST00000359171 NDUFA7O95182 113 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 ZSWIM8A7E2V4 1837 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 BRWD1-AS2P59051 145 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 PLCE1Q9P212 2302 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 REG3AQ06141 175 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 U3KQK5 164 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 MAPKAPK5-AS1Q8N8E1 139 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 TP53TG3Q9ULZ0 132 aa10.97□□□□□ -0.65
NUP98-203ENST00000359171 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
NUP98-203ENST00000359171 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.66
NUP98-203ENST00000359171 MED13Q9UHV7 2174 aa10.96□□□□□ -0.66
NUP98-203ENST00000359171 MRPS12O15235 138 aaKnown RBP10.95□□□□□ -0.66
NUP98-203ENST00000359171 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
NUP98-203ENST00000359171 Q6ZTI0 123 aa10.95□□□□□ -0.66
NUP98-203ENST00000359171 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
NUP98-203ENST00000359171 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
NUP98-203ENST00000359171 ODF3BA8MYP8 253 aa10.94□□□□□ -0.66
NUP98-203ENST00000359171 TIMM17BO60830 172 aa10.94□□□□□ -0.66
NUP98-203ENST00000359171 CHCHD10Q8WYQ3 142 aaPredicted RBP10.94□□□□□ -0.66
NUP98-203ENST00000359171 DEFB4AO15263 64 aa10.94□□□□□ -0.66
NUP98-203ENST00000359171 CASC2Q6XLA1 102 aa10.94□□□□□ -0.66
NUP98-203ENST00000359171 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
NUP98-203ENST00000359171 TNRC6AQ8NDV7 1962 aaKnown RBP10.94□□□□□ -0.66
NUP98-203ENST00000359171 K7EQG2 157 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms