RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
GYPC-202ENST00000356887 H3BMG7 143 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 M0QY20 66 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 EMP1P54849 157 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 HERVK_113P61574 105 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 SCGB1D4Q6XE38 83 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 Q8N1Y9 231 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 ANAPC13Q9BS18 74 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
GYPC-202ENST00000356887 ZNF876PQ49A33 203 aa13.08□□□□□ -0.32
GYPC-202ENST00000356887 AMTNQ6UX39 209 aa13.08□□□□□ -0.32
GYPC-202ENST00000356887 UBE2D1P51668 147 aa13.08□□□□□ -0.32
GYPC-202ENST00000356887 LINC01356Q8N9X3 169 aa13.08□□□□□ -0.32
GYPC-202ENST00000356887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.07□□□□□ -0.32
GYPC-202ENST00000356887 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
GYPC-202ENST00000356887 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
GYPC-202ENST00000356887 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
GYPC-202ENST00000356887 PRO0461Q9UI25 63 aa13.07□□□□□ -0.32
GYPC-202ENST00000356887 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
GYPC-202ENST00000356887 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 RHOHQ15669 191 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 ZNF56Q15929 161 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 RNF152Q8N8N0 203 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 FBN2P35556 2912 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 A0A0J9YY99 117 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 SMIM20Q8N5G0 67 aa13.06□□□□□ -0.32
GYPC-202ENST00000356887 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
GYPC-202ENST00000356887 TRPT1Q86TN4 253 aaKnown RBP13.05□□□□□ -0.32
GYPC-202ENST00000356887 C1QTNF4Q9BXJ3 329 aa13.05□□□□□ -0.32
GYPC-202ENST00000356887 A0A096LNT2 108 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 TSPEAR-AS2P59090 65 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 CSPG4Q6UVK1 2322 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 P0DMU3 169 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 FAM231AP0DMU4 169 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 FAM231CP0DMU5 169 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 KRTAP10-9P60411 292 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
GYPC-202ENST00000356887 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 B5MCH6 92 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 J3QLI3 93 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 CENPEQ02224 2701 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 ELANEP08246 267 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 DUX5Q96PT3 197 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 AMELXQ99217 191 aa13.03□□□□□ -0.32
GYPC-202ENST00000356887 CSMD2Q7Z408 3487 aa13.02□□□□□ -0.32
GYPC-202ENST00000356887 HOXD3P31249 432 aaPredicted RBP13.02□□□□□ -0.33
GYPC-202ENST00000356887 Q6ZUT4 128 aa13.02□□□□□ -0.33
GYPC-202ENST00000356887 OPRPNQ99935 248 aaPredicted RBP13.02□□□□□ -0.33
GYPC-202ENST00000356887 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
GYPC-202ENST00000356887 WIPF1O43516 503 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 ETDBQ3ZM63 59 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 TRGV11A0A075B6L2 103 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 I3L3M4 83 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 C5orf47Q569G3 176 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 C20orf203Q8NBC4 194 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 UBE2E2Q96LR5 201 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
GYPC-202ENST00000356887 GAGE12JA6NER3 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 J3QQQ9 107 aa13□□□□□ -0.33
GYPC-202ENST00000356887 GAGE7O76087 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 TGFAP01135 160 aa13□□□□□ -0.33
GYPC-202ENST00000356887 IGHV3-30P01768 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 GAGE12FP0CL80 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 GAGE12GP0CL81 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 GAGE12IP0CL82 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 IGHV3-30-5P0DP03 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 GAGE4Q13068 117 aa13□□□□□ -0.33
GYPC-202ENST00000356887 ZNF702PQ9H963 129 aa13□□□□□ -0.33
GYPC-202ENST00000356887 POLQO75417 2590 aa13□□□□□ -0.33
GYPC-202ENST00000356887 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
GYPC-202ENST00000356887 ABCA12Q86UK0 2595 aa12.99□□□□□ -0.33
GYPC-202ENST00000356887 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
GYPC-202ENST00000356887 TMEM223A0PJW6 202 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 APOMO95445 188 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 RBMY1A1P0DJD3 496 aaKnown RBP12.98□□□□□ -0.33
GYPC-202ENST00000356887 RBMY1CP0DJD4 496 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 FOXI1Q12951 378 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 RBMY1FQ15415 496 aaKnown RBP12.98□□□□□ -0.33
GYPC-202ENST00000356887 Q6YL49 198 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 MAPK1IP1LQ8NDC0 245 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
GYPC-202ENST00000356887 CITED1Q99966 193 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 LEPROTO15243 131 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 FSHBP01225 129 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 UBE2D3P61077 147 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 UBE2D2P62837 147 aa12.98□□□□□ -0.33
GYPC-202ENST00000356887 MAP1AP78559 2803 aaPredicted RBP12.98□□□□□ -0.33
GYPC-202ENST00000356887 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
GYPC-202ENST00000356887 EDA2RQ9HAV5 297 aa12.97□□□□□ -0.33
GYPC-202ENST00000356887 KNCNA6PVL3 124 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms