RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
TRIM4-203ENST00000355947 CRYBG3Q68DQ2 2970 aa10.21□□□□□ -0.78
TRIM4-203ENST00000355947 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.78
TRIM4-203ENST00000355947 CCDC179H3BU77 68 aa10.21□□□□□ -0.78
TRIM4-203ENST00000355947 Q8N1Y9 231 aa10.21□□□□□ -0.78
TRIM4-203ENST00000355947 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 COX6B1P14854 86 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 UBE2D3P61077 147 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 UBE2D2P62837 147 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 ZFHX3Q15911 3703 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 A0A1W2PPR1 153 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 SLC25A29Q8N8R3 303 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 ZFYVE26Q68DK2 2539 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 UBE2E1P51965 193 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 PROK1P58294 105 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 TMEM190Q8WZ59 177 aa10.2□□□□□ -0.78
TRIM4-203ENST00000355947 IGHV3-16A0A0C4DH30 117 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 GAGE5Q13069 117 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 GAGE6Q13070 117 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 C5orf56Q8N8D9 126 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 ABCA12Q86UK0 2595 aa10.19□□□□□ -0.78
TRIM4-203ENST00000355947 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 RS1O15537 224 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 SIRPDQ9H106 197 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 PPP1R17O96001 155 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 KHDC1LQ5JSQ8 128 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 C10orf99Q6UWK7 81 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 MOB4Q9Y3A3 225 aa10.18□□□□□ -0.78
TRIM4-203ENST00000355947 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
TRIM4-203ENST00000355947 IGF2-ASQ6U949 168 aa10.17□□□□□ -0.78
TRIM4-203ENST00000355947 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
TRIM4-203ENST00000355947 ATXN8Q156A1 80 aa10.17□□□□□ -0.78
TRIM4-203ENST00000355947 OOSP1A8MZH6 123 aa10.17□□□□□ -0.78
TRIM4-203ENST00000355947 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 TRIAP1O43715 76 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 DGAT2L7PQ6IED9 249 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
TRIM4-203ENST00000355947 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
TRIM4-203ENST00000355947 H3BMM0 161 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 IGHV4-38-2P0DP08 117 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 UBE2WQ96B02 151 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 ZANQ9Y493 2812 aa10.16□□□□□ -0.78
TRIM4-203ENST00000355947 IGKV3OR2-268A0A0C4DH90 116 aa10.15□□□□□ -0.78
TRIM4-203ENST00000355947 ID1P41134 155 aa10.15□□□□□ -0.78
TRIM4-203ENST00000355947 SYNJ2BPP57105 145 aa10.15□□□□□ -0.78
TRIM4-203ENST00000355947 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
TRIM4-203ENST00000355947 ITLN2Q8WWU7 325 aaPredicted RBP10.15□□□□□ -0.78
TRIM4-203ENST00000355947 M0R2P5 195 aa10.15□□□□□ -0.79
TRIM4-203ENST00000355947 COX6CP09669 75 aa10.15□□□□□ -0.79
TRIM4-203ENST00000355947 IFITM1P13164 125 aa10.15□□□□□ -0.79
TRIM4-203ENST00000355947 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.79
TRIM4-203ENST00000355947 ADORA2A-AS1P86434 159 aa10.15□□□□□ -0.79
TRIM4-203ENST00000355947 NDUFA12Q9UI09 145 aa10.15□□□□□ -0.79
TRIM4-203ENST00000355947 NDUFV3P56181 108 aaKnown RBP10.14□□□□□ -0.79
TRIM4-203ENST00000355947 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
TRIM4-203ENST00000355947 Q9UF83 564 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 RHODO00212 210 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE7O76087 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
TRIM4-203ENST00000355947 GAGE4Q13068 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 EBI3Q14213 229 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 TMEM141Q96I45 108 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 DAZ1Q9NQZ3 744 aaKnown RBP10.14□□□□□ -0.79
TRIM4-203ENST00000355947 IGHV3-30-3P0DP02 117 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 LY6DQ14210 128 aa10.14□□□□□ -0.79
TRIM4-203ENST00000355947 LRRK2Q5S007 2527 aa10.13□□□□□ -0.79
TRIM4-203ENST00000355947 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
TRIM4-203ENST00000355947 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
TRIM4-203ENST00000355947 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
TRIM4-203ENST00000355947 EIF4EBP3O60516 100 aaPredicted RBP10.13□□□□□ -0.79
TRIM4-203ENST00000355947 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
TRIM4-203ENST00000355947 NDUFA4O00483 81 aa10.12□□□□□ -0.79
TRIM4-203ENST00000355947 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
TRIM4-203ENST00000355947 PIEZO1Q92508 2521 aa10.12□□□□□ -0.79
TRIM4-203ENST00000355947 ABCA2Q9BZC7 2435 aa10.12□□□□□ -0.79
TRIM4-203ENST00000355947 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
TRIM4-203ENST00000355947 LEPROTO15243 131 aa10.12□□□□□ -0.79
TRIM4-203ENST00000355947 TMEM263Q8WUH6 116 aaKnown RBP10.12□□□□□ -0.79
TRIM4-203ENST00000355947 LINC00315P59091 139 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 HERV-K104P63124 156 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 LENEPQ9Y5L5 61 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 U3KQE9 123 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
TRIM4-203ENST00000355947 MEIG1Q5JSS6 88 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
TRIM4-203ENST00000355947 FAM223BA6NKX1 122 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms