RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TNFSF18Q9UNG2 199 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ASXL3Q9C0F0 2248 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRBV20OR9-2A0A075B6H5 130 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TRBV24-1A0A075B6N3 115 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 C3orf85A0A1B0GTC6 90 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CTXND1A0A1B0GTU2 59 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 LOC107986453A0A1B0GWG9 222 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TNFSF15O95150 251 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 IGLV7-43P04211 117 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ASAH2BP0C7U1 165 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CKS2P33552 79 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM258P61165 79 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H4AP62805 103 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HBBP68871 147 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SERF2P84101 59 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MEF2BQ02080 365 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H1AQ02539 215 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HSD52Q0P140 79 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM155Q4W5P6 130 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 SDIM1Q6ZPB5 146 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 OR4D11Q8NGI4 311 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 VSTM2AQ8TAG5 236 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MS4A6EQ96DS6 147 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TSPAN32Q96QS1 320 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 TXNDC17Q9BRA2 123 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CHST6Q9GZX3 395 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CST9LQ9H4G1 147 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 ST20Q9HBF5 79 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 GPR84Q9NQS5 396 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 CMC2Q9NRP2 79 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 NHP2Q9NX24 153 aaKnown RBP0.92□□□□□ -2.26
BRCA1-202ENST00000354071 HILPDAQ9Y5L2 63 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 MXRA5Q9NR99 2828 aa0.92□□□□□ -2.26
BRCA1-202ENST00000354071 IGLV3-12A0A075B6K2 115 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV2A0A0B4J234 112 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 A0A1B0GWA3 101 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 MRPL33O75394 65 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PPP1R17O96001 155 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RBP4P02753 201 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM10L2AP0DMW4 78 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM10L2BP0DMW5 78 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 IFITM1P13164 125 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CD52P31358 61 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 LPAR6P43657 344 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HSPE1P61604 102 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 BTG2P78543 158 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 OR8B8Q15620 311 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 MEIG1Q5JSS6 88 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 S100A7L2Q5SY68 101 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 IBA57Q5T440 356 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SFTA2Q6UW10 78 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 UNQ5815/PRO19632Q6UWF5 114 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 AMTNQ6UX39 209 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 Q8NAQ8 132 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RMI2Q96E14 147 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 Q96M85 177 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TUBA4BQ9H853 241 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM106BQ9NUM4 274 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RP1P56715 2156 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SPTBP11277 2137 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HEATR1Q9H583 2144 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ITPR2Q14571 2701 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV12-3A0A0B4J271 114 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 A0A0D9SEW6 157 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ARRDC5A6NEK1 342 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 A8MWP6 167 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 M0R135 149 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CTSDP07339 412 aaPredicted RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 MGPP08493 103 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 HRES1P13985 223 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ATXN8Q156A1 80 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 C12orf74Q32Q52 190 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXN1Q5VSR9 72 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 AAED1Q7RTV5 226 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 APCDD1LQ8NCL9 501 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 H1FXQ92522 213 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CARD19Q96LW7 228 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 NABP2Q9BQ15 211 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 PBOV1Q9GZY1 135 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 NXT2Q9NPJ8 142 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 COA4Q9NYJ1 87 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 R4GMQ9 66 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 V9GYH0 126 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ATAD5Q96QE3 1844 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 MYH6P13533 1939 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ASCC3Q8N3C0 2202 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TRBV20-1A0A075B6N2 111 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CDC42EP2O14613 210 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CCL16O15467 120 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 LGALS1P09382 135 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SLC25A16P16260 332 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 AZU1P20160 251 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 CBLN1P23435 193 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 SPINT3P49223 89 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 RBM3P98179 157 aaKnown RBP0.91□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF56Q15929 161 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 IGFBP7Q16270 282 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM170BQ5T4T1 132 aa0.91□□□□□ -2.26
BRCA1-202ENST00000354071 C22orf39Q6P5X5 142 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms