RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HECTD1Q9ULT8 2610 aa15.85■□□□□ 0.13
PTPN18-202ENST00000347849 RNF152Q8N8N0 203 aa15.85■□□□□ 0.13
PTPN18-202ENST00000347849 LOC107984156A0A0G2JMH3 177 aa15.84■□□□□ 0.13
PTPN18-202ENST00000347849 EMP1P54849 157 aa15.84■□□□□ 0.13
PTPN18-202ENST00000347849 ARL17AQ8IVW1 177 aa15.84■□□□□ 0.13
PTPN18-202ENST00000347849 ESM1Q9NQ30 184 aa15.84■□□□□ 0.13
PTPN18-202ENST00000347849 DUSP14O95147 198 aaKnown RBP15.84■□□□□ 0.13
PTPN18-202ENST00000347849 PSMB2P49721 201 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 SLURP1P55000 103 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 FAM19A4Q96LR4 140 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 MTORP42345 2549 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 A6NJY4 79 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 CRYGDP07320 174 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 ZFP2Q6ZN57 461 aa15.83■□□□□ 0.12
PTPN18-202ENST00000347849 DNAJC9-AS1A6NH13 148 aa15.82■□□□□ 0.12
PTPN18-202ENST00000347849 ZNF688P0C7X2 276 aa15.82■□□□□ 0.12
PTPN18-202ENST00000347849 SMCPP49901 116 aaPredicted RBP15.82■□□□□ 0.12
PTPN18-202ENST00000347849 DLX4Q92988 240 aaPredicted RBP15.82■□□□□ 0.12
PTPN18-202ENST00000347849 CLUHP3Q96NS8 147 aa15.82■□□□□ 0.12
PTPN18-202ENST00000347849 FOXI1Q12951 378 aa15.82■□□□□ 0.12
PTPN18-202ENST00000347849 CFAP126Q5VTH2 177 aa15.81■□□□□ 0.12
PTPN18-202ENST00000347849 Q6ZSV7 163 aa15.81■□□□□ 0.12
PTPN18-202ENST00000347849 SORL1Q92673 2214 aa15.81■□□□□ 0.12
PTPN18-202ENST00000347849 RNASE3P12724 160 aaKnown RBP15.8■□□□□ 0.12
PTPN18-202ENST00000347849 TSPAN13O95857 204 aa15.8■□□□□ 0.12
PTPN18-202ENST00000347849 UBE2D1P51668 147 aa15.8■□□□□ 0.12
PTPN18-202ENST00000347849 C11orf86A6NJI1 115 aa15.79■□□□□ 0.12
PTPN18-202ENST00000347849 ZNF418Q8TF45 676 aaPredicted RBP15.79■□□□□ 0.12
PTPN18-202ENST00000347849 TSHBP01222 138 aa15.79■□□□□ 0.12
PTPN18-202ENST00000347849 A0A1B0GV72 72 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 KHDC1LQ5JSQ8 128 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 NFE4Q86UQ8 179 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 C1QTNF4Q9BXJ3 329 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 SETD2Q9BYW2 2564 aaPredicted RBP15.78■□□□□ 0.12
PTPN18-202ENST00000347849 LGALS9O00182 355 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 SYT8Q8NBV8 401 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 YAE1D1Q9NRH1 226 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 TP53TG1Q9Y2A0 90 aa15.78■□□□□ 0.12
PTPN18-202ENST00000347849 C11orf44Q8N8P7 122 aa15.77■□□□□ 0.12
PTPN18-202ENST00000347849 IGLV4-69A0A075B6H9 119 aa15.77■□□□□ 0.11
PTPN18-202ENST00000347849 PPP1R17O96001 155 aa15.77■□□□□ 0.11
PTPN18-202ENST00000347849 IGKV3-20P01619 116 aa15.77■□□□□ 0.11
PTPN18-202ENST00000347849 PTH2Q96A98 100 aa15.77■□□□□ 0.11
PTPN18-202ENST00000347849 JPT2Q9H910 190 aa15.77■□□□□ 0.11
PTPN18-202ENST00000347849 CD7P09564 240 aa15.76■□□□□ 0.11
PTPN18-202ENST00000347849 MUC4Q99102 2169 aa15.76■□□□□ 0.11
PTPN18-202ENST00000347849 K7EQG2 157 aa15.76■□□□□ 0.11
PTPN18-202ENST00000347849 ID1P41134 155 aa15.76■□□□□ 0.11
PTPN18-202ENST00000347849 RPL39P62891 51 aaKnown RBP15.76■□□□□ 0.11
PTPN18-202ENST00000347849 A0A0J9YY99 117 aa15.75■□□□□ 0.11
PTPN18-202ENST00000347849 APRG1Q8IVJ8 170 aa15.75■□□□□ 0.11
PTPN18-202ENST00000347849 IGIPA6NJ69 53 aa15.75■□□□□ 0.11
PTPN18-202ENST00000347849 MED14OSP0DP75 135 aa15.75■□□□□ 0.11
PTPN18-202ENST00000347849 SMR3AQ99954 134 aa15.75■□□□□ 0.11
PTPN18-202ENST00000347849 LINC00315P59091 139 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 CKS1BP61024 79 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 NDUFA11Q86Y39 141 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 TMEM86BQ8N661 226 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 KIF25-AS1Q9Y6Z4 181 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 UBE2D3P61077 147 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 HERVK_113P61574 105 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 UBE2D2P62837 147 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 PMVKQ15126 192 aa15.74■□□□□ 0.11
PTPN18-202ENST00000347849 A0A087WWL8 130 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 TMEM170BQ5T4T1 132 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 F5H697 171 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 ATP6V0E2Q8NHE4 81 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 CDIP1Q9H305 208 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 NOTCH2Q04721 2471 aa15.73■□□□□ 0.11
PTPN18-202ENST00000347849 KLLNB2CW77 178 aa15.72■□□□□ 0.11
PTPN18-202ENST00000347849 TSPEAR-AS2P59090 65 aa15.72■□□□□ 0.11
PTPN18-202ENST00000347849 PAPPA-AS1Q5QFB9 102 aa15.72■□□□□ 0.11
PTPN18-202ENST00000347849 TRAV12-2A0A075B6T6 113 aa15.71■□□□□ 0.11
PTPN18-202ENST00000347849 POLR2KP53803 58 aaKnown RBP15.71■□□□□ 0.11
PTPN18-202ENST00000347849 SUMO4Q6EEV6 95 aa15.71■□□□□ 0.11
PTPN18-202ENST00000347849 POM121L12Q8N7R1 296 aa15.71■□□□□ 0.11
PTPN18-202ENST00000347849 C4orf3Q8WVX3 66 aa15.71■□□□□ 0.11
PTPN18-202ENST00000347849 NIPBLQ6KC79 2804 aaeCLIP15.71■□□□□ 0.11
PTPN18-202ENST00000347849 A0A0J9YX75 114 aa15.71■□□□□ 0.1
PTPN18-202ENST00000347849 TCL1BO95988 128 aa15.71■□□□□ 0.1
PTPN18-202ENST00000347849 CFC1BP0CG36 223 aa15.71■□□□□ 0.1
PTPN18-202ENST00000347849 CFC1P0CG37 223 aa15.71■□□□□ 0.1
PTPN18-202ENST00000347849 KIR2DL4Q99706 377 aa15.71■□□□□ 0.1
PTPN18-202ENST00000347849 TRAV12-3A0A0B4J271 114 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 FAM159AQ6UWV7 190 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 VCYO14598 125 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 IGHV3-30P01768 117 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 IGHV3-30-5P0DP03 117 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 SNRPD3P62318 126 aaKnown RBP15.7■□□□□ 0.1
PTPN18-202ENST00000347849 ZNRF2Q8NHG8 242 aa15.7■□□□□ 0.1
PTPN18-202ENST00000347849 FHL3Q13643 280 aa15.69■□□□□ 0.1
PTPN18-202ENST00000347849 A0A1W2PRX2 142 aa15.69■□□□□ 0.1
PTPN18-202ENST00000347849 CARD19Q96LW7 228 aa15.69■□□□□ 0.1
PTPN18-202ENST00000347849 TRBV7-9A0A0J9YWB2 115 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 SDHAF1A6NFY7 115 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 SPINK8P0C7L1 97 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 SLC25A29Q8N8R3 303 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 TMEM141Q96I45 108 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 NXPH4O95158 308 aa15.68■□□□□ 0.1
PTPN18-202ENST00000347849 SCGB1C2P0DMR2 95 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms