RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 SRIP30626 198 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 GAGE1Q13065 139 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 GAGE4Q13068 117 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 GAGE5Q13069 117 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 MRPL51Q4U2R6 128 aaKnown RBP12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 TMEM136Q6ZRR5 245 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 MRAP2Q96G30 205 aa12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
UBE2E1-202ENST00000346855 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
UBE2E1-202ENST00000346855 COX19Q49B96 90 aa12.68□□□□□ -0.38
UBE2E1-202ENST00000346855 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
UBE2E1-202ENST00000346855 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
UBE2E1-202ENST00000346855 NIT2Q9NQR4 276 aa12.68□□□□□ -0.38
UBE2E1-202ENST00000346855 LYSTQ99698 3801 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 NCR2O95944 276 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 UBE2D3P61077 147 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 UBE2D2P62837 147 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 NEGR1Q7Z3B1 354 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 GNB1LQ9BYB4 327 aa12.67□□□□□ -0.38
UBE2E1-202ENST00000346855 SCO1O75880 301 aa12.66□□□□□ -0.38
UBE2E1-202ENST00000346855 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
UBE2E1-202ENST00000346855 OR10J3Q5JRS4 329 aa12.65□□□□□ -0.38
UBE2E1-202ENST00000346855 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
UBE2E1-202ENST00000346855 ALMS1Q8TCU4 4167 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 D6R8Y8 96 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 MT-ND6P03923 174 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 CKS2P33552 79 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 NRACQ8N912 160 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 TNFRSF18Q9Y5U5 241 aa12.64□□□□□ -0.39
UBE2E1-202ENST00000346855 TRBV6-5A0A0K0K1A5 114 aa12.63□□□□□ -0.39
UBE2E1-202ENST00000346855 PPBPP02775 128 aa12.62□□□□□ -0.39
UBE2E1-202ENST00000346855 ESRGQ1W209 222 aa12.62□□□□□ -0.39
UBE2E1-202ENST00000346855 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
UBE2E1-202ENST00000346855 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
UBE2E1-202ENST00000346855 VPS13DQ5THJ4 4388 aa12.62□□□□□ -0.39
UBE2E1-202ENST00000346855 PPP1R17O96001 155 aa12.61□□□□□ -0.39
UBE2E1-202ENST00000346855 APCSP02743 223 aa12.61□□□□□ -0.39
UBE2E1-202ENST00000346855 TIRAPP58753 221 aa12.61□□□□□ -0.39
UBE2E1-202ENST00000346855 MRPL18Q9H0U6 180 aaKnown RBP12.61□□□□□ -0.39
UBE2E1-202ENST00000346855 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
UBE2E1-202ENST00000346855 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 CCL18P55774 89 aa12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 DAZ4Q86SG3 579 aaKnown RBP12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 DAZ3Q9NR90 486 aaKnown RBP12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 LINC00588Q9Y4M8 146 aa12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 DNAH1Q9P2D7 4330 aa12.6□□□□□ -0.39
UBE2E1-202ENST00000346855 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 PHOX2AO14813 284 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 TNFRSF6BO95407 300 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 NPYP01303 97 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 KIAA1644Q3SXP7 199 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 PRELID3AQ96N28 172 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 ST20Q9HBF5 79 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 TRAPPC1Q9Y5R8 145 aa12.59□□□□□ -0.39
UBE2E1-202ENST00000346855 COLCA2A8K830 154 aa12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 UBE2DNLQ8IWF7 75 aa12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 LINC00476Q8WZB0 136 aa12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 LAMTOR2Q9Y2Q5 125 aa12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 MRPS16Q9Y3D3 137 aaKnown RBP12.58□□□□□ -0.4
UBE2E1-202ENST00000346855 POLR2KP53803 58 aaKnown RBP12.57□□□□□ -0.4
UBE2E1-202ENST00000346855 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
UBE2E1-202ENST00000346855 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
UBE2E1-202ENST00000346855 LELP1Q5T871 98 aa12.56□□□□□ -0.4
UBE2E1-202ENST00000346855 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
UBE2E1-202ENST00000346855 SACSQ9NZJ4 4579 aa12.56□□□□□ -0.4
UBE2E1-202ENST00000346855 RPL32P62910 135 aaKnown RBP12.56□□□□□ -0.4
UBE2E1-202ENST00000346855 TMEM97Q5BJF2 176 aa12.56□□□□□ -0.4
UBE2E1-202ENST00000346855 TRBV27A0A0K0K1C4 114 aa12.55□□□□□ -0.4
UBE2E1-202ENST00000346855 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
UBE2E1-202ENST00000346855 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 I3L3M4 83 aa12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 RAB5AP20339 215 aa12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 COTL1Q14019 142 aa12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 ALKBH7Q9BT30 221 aaPredicted RBP12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
UBE2E1-202ENST00000346855 PRSS47A8MTI9 375 aa12.53□□□□□ -0.4
UBE2E1-202ENST00000346855 LY6G6CO95867 125 aa12.53□□□□□ -0.4
UBE2E1-202ENST00000346855 PMCHP20382 165 aa12.53□□□□□ -0.4
UBE2E1-202ENST00000346855 MAP1LC3AQ9H492 121 aa12.53□□□□□ -0.4
UBE2E1-202ENST00000346855 VCYO14598 125 aa12.52□□□□□ -0.41
UBE2E1-202ENST00000346855 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
UBE2E1-202ENST00000346855 DEFB104AQ8WTQ1 72 aa12.52□□□□□ -0.41
UBE2E1-202ENST00000346855 TRAV8-6A0A0B4J262 113 aa12.51□□□□□ -0.41
UBE2E1-202ENST00000346855 TSHBP01222 138 aa12.51□□□□□ -0.41
UBE2E1-202ENST00000346855 IQCJQ1A5X6 159 aa12.51□□□□□ -0.41
UBE2E1-202ENST00000346855 DNAH6Q9C0G6 4158 aa12.51□□□□□ -0.41
UBE2E1-202ENST00000346855 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
UBE2E1-202ENST00000346855 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms