RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 HTN3P15516 51 aa11.32□□□□□ -0.6
RAB5C-201ENST00000346213 G0S2P27469 103 aa11.32□□□□□ -0.6
RAB5C-201ENST00000346213 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 S100A4P26447 101 aaKnown RBP11.31□□□□□ -0.6
RAB5C-201ENST00000346213 AMTP48728 403 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 TDRG1Q3Y452 100 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 FAM159AQ6UWV7 190 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
RAB5C-201ENST00000346213 RNF185Q96GF1 192 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
RAB5C-201ENST00000346213 GNRH2O43555 120 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 HSBP1O75506 76 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 DNAH17Q9UFH2 4485 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 D6R8Y8 96 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 PPBPP02775 128 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 DEFB130BP0DP73 79 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 DEFB130AP0DP74 79 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 RNASEKQ6P5S7 137 aaKnown RBP11.3□□□□□ -0.6
RAB5C-201ENST00000346213 SMIM15Q7Z3B0 74 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 C20orf144Q9BQM9 153 aa11.3□□□□□ -0.6
RAB5C-201ENST00000346213 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
RAB5C-201ENST00000346213 PMCHP20382 165 aa11.29□□□□□ -0.6
RAB5C-201ENST00000346213 DAD1P61803 113 aa11.29□□□□□ -0.6
RAB5C-201ENST00000346213 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
RAB5C-201ENST00000346213 CKS2P33552 79 aa11.28□□□□□ -0.6
RAB5C-201ENST00000346213 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
RAB5C-201ENST00000346213 PHLDA3Q9Y5J5 127 aa11.28□□□□□ -0.6
RAB5C-201ENST00000346213 LYRM9A8MSI8 78 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 EVI2AP22794 236 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 TCTAP57738 103 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 LINC00612Q8N6U2 182 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 C11orf72Q8NBR9 251 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 TMEM263Q8WUH6 116 aaKnown RBP11.27□□□□□ -0.6
RAB5C-201ENST00000346213 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.6
RAB5C-201ENST00000346213 NXPH4O95158 308 aa11.27□□□□□ -0.61
RAB5C-201ENST00000346213 C16orf74Q96GX8 76 aa11.27□□□□□ -0.61
RAB5C-201ENST00000346213 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-201ENST00000346213 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
RAB5C-201ENST00000346213 MIEN1Q9BRT3 115 aa11.26□□□□□ -0.61
RAB5C-201ENST00000346213 M0R381 172 aa11.25□□□□□ -0.61
RAB5C-201ENST00000346213 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
RAB5C-201ENST00000346213 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
RAB5C-201ENST00000346213 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
RAB5C-201ENST00000346213 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 SMKR1H3BMG3 65 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 NPYP01303 97 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 NCR2O95944 276 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 Q6ZTI0 123 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 FA2HQ7L5A8 372 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 DPH3P1Q9H4G8 78 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
RAB5C-201ENST00000346213 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
RAB5C-201ENST00000346213 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-201ENST00000346213 TRGV11A0A075B6L2 103 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 GAGE7O76087 117 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 TNFRSF6BO95407 300 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 NPSP0C0P6 89 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 PKD1P98161 4303 aa11.22□□□□□ -0.61
RAB5C-201ENST00000346213 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 F5H768 121 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 GAS8-AS1O95177 125 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 C3orf79P0CE67 100 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 KRTDAPP60985 99 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 PKHD1P08F94 4074 aa11.21□□□□□ -0.61
RAB5C-201ENST00000346213 CBY3A6NI87 242 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 K7EP13 123 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 M0R2N4 97 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 C14orf178Q8N769 122 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-201ENST00000346213 NRACQ8N912 160 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
RAB5C-201ENST00000346213 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
RAB5C-201ENST00000346213 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
RAB5C-201ENST00000346213 ATP5G1P05496 136 aa11.19□□□□□ -0.62
RAB5C-201ENST00000346213 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-201ENST00000346213 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
RAB5C-201ENST00000346213 Q8N976 141 aa11.19□□□□□ -0.62
RAB5C-201ENST00000346213 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
RAB5C-201ENST00000346213 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms