RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 A0A1B0GWB2 263 aa13.52□□□□□ -0.24
PDE4A-202ENST00000344979 LINC01549A6NIU2 74 aa13.52□□□□□ -0.24
PDE4A-202ENST00000344979 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.24
PDE4A-202ENST00000344979 TRBV6-5A0A0K0K1A5 114 aa13.52□□□□□ -0.25
PDE4A-202ENST00000344979 SLURP1P55000 103 aa13.52□□□□□ -0.25
PDE4A-202ENST00000344979 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.25
PDE4A-202ENST00000344979 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 F8W1H4 67 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 HIST2H2BDQ6DRA6 164 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 A0A096LNT2 108 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 A6NJY4 79 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 GAGE13Q4V321 117 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 DUX3Q96PT4 197 aa13.51□□□□□ -0.25
PDE4A-202ENST00000344979 RBMY1A1P0DJD3 496 aaKnown RBP13.5□□□□□ -0.25
PDE4A-202ENST00000344979 RBMY1CP0DJD4 496 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 RBMY1FQ15415 496 aaKnown RBP13.5□□□□□ -0.25
PDE4A-202ENST00000344979 LOC107984156A0A0G2JMH3 177 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 A0A0J9YY99 117 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 P0DMU3 169 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 ARL17AQ8IVW1 177 aa13.5□□□□□ -0.25
PDE4A-202ENST00000344979 ELANEP08246 267 aa13.49□□□□□ -0.25
PDE4A-202ENST00000344979 DEFB131AP59861 70 aa13.49□□□□□ -0.25
PDE4A-202ENST00000344979 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
PDE4A-202ENST00000344979 J3QLI3 93 aa13.49□□□□□ -0.25
PDE4A-202ENST00000344979 PROK1P58294 105 aa13.49□□□□□ -0.25
PDE4A-202ENST00000344979 SPANXB1Q9NS25 103 aaPredicted RBP13.49□□□□□ -0.25
PDE4A-202ENST00000344979 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
PDE4A-202ENST00000344979 EPG5Q9HCE0 2579 aa13.48□□□□□ -0.25
PDE4A-202ENST00000344979 ZNF469Q96JG9 3925 aaPredicted RBP13.48□□□□□ -0.25
PDE4A-202ENST00000344979 Q6YL49 198 aa13.48□□□□□ -0.25
PDE4A-202ENST00000344979 TRGV11A0A075B6L2 103 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 I3L3M4 83 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 J3QQQ9 107 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 LGALS3P17931 250 aaKnown RBP13.47□□□□□ -0.25
PDE4A-202ENST00000344979 NSUN5P1Q3KNT7 163 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 CHD6Q8TD26 2715 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 USP24Q9UPU5 2620 aa13.47□□□□□ -0.25
PDE4A-202ENST00000344979 TSPAN13O95857 204 aa13.46□□□□□ -0.25
PDE4A-202ENST00000344979 UBE2D1P51668 147 aa13.46□□□□□ -0.25
PDE4A-202ENST00000344979 RHOHQ15669 191 aa13.46□□□□□ -0.25
PDE4A-202ENST00000344979 C20orf203Q8NBC4 194 aa13.46□□□□□ -0.25
PDE4A-202ENST00000344979 NF1P21359 2839 aa13.46□□□□□ -0.25
PDE4A-202ENST00000344979 PSMB2P49721 201 aa13.45□□□□□ -0.26
PDE4A-202ENST00000344979 AKAP9Q99996 3911 aa13.45□□□□□ -0.26
PDE4A-202ENST00000344979 A0A0J9YXV3 536 aa13.45□□□□□ -0.26
PDE4A-202ENST00000344979 SONP18583 2426 aaKnown RBP13.44□□□□□ -0.26
PDE4A-202ENST00000344979 IGHV4-31P0DP07 118 aa13.44□□□□□ -0.26
PDE4A-202ENST00000344979 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
PDE4A-202ENST00000344979 VCX2Q9H322 139 aa13.44□□□□□ -0.26
PDE4A-202ENST00000344979 PRO0461Q9UI25 63 aa13.44□□□□□ -0.26
PDE4A-202ENST00000344979 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
PDE4A-202ENST00000344979 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 SLC25A29Q8N8R3 303 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 Q9UF83 564 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 INSL3P51460 131 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 RNASE13Q5GAN3 156 aaKnown RBP13.43□□□□□ -0.26
PDE4A-202ENST00000344979 AMELXQ99217 191 aa13.43□□□□□ -0.26
PDE4A-202ENST00000344979 UBR5O95071 2799 aaPredicted RBP13.43□□□□□ -0.26
PDE4A-202ENST00000344979 SETD2Q9BYW2 2564 aaPredicted RBP13.43□□□□□ -0.26
PDE4A-202ENST00000344979 IGLV4-3A0A075B6K6 122 aa13.42□□□□□ -0.26
PDE4A-202ENST00000344979 RBMY1BA6NDE4 496 aaKnown RBP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 RBMY1EA6NEQ0 496 aaKnown RBP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 RBMY1DP0C7P1 496 aaKnown RBP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 NFE4Q86UQ8 179 aa13.42□□□□□ -0.26
PDE4A-202ENST00000344979 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
PDE4A-202ENST00000344979 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 NIPBLQ6KC79 2804 aaeCLIP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 DLX4Q92988 240 aaPredicted RBP13.42□□□□□ -0.26
PDE4A-202ENST00000344979 TMEM223A0PJW6 202 aa13.41□□□□□ -0.26
PDE4A-202ENST00000344979 H3BMM0 161 aa13.41□□□□□ -0.26
PDE4A-202ENST00000344979 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
PDE4A-202ENST00000344979 SPAG8Q99932 426 aaPredicted RBP13.41□□□□□ -0.26
PDE4A-202ENST00000344979 GTSF1LQ9H1H1 148 aa13.41□□□□□ -0.26
PDE4A-202ENST00000344979 CFC1BP0CG36 223 aa13.41□□□□□ -0.26
PDE4A-202ENST00000344979 CFC1P0CG37 223 aa13.41□□□□□ -0.26
PDE4A-202ENST00000344979 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
PDE4A-202ENST00000344979 NBPF19A0A087WUL8 3843 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 RHODO00212 210 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 CD28P10747 220 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 TNFRSF18Q9Y5U5 241 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 J3QR89 54 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 CLUHP3Q96NS8 147 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 SPXQ9BT56 116 aa13.4□□□□□ -0.26
PDE4A-202ENST00000344979 TRAV2A0A0B4J234 112 aa13.39□□□□□ -0.27
PDE4A-202ENST00000344979 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
PDE4A-202ENST00000344979 FSHBP01225 129 aa13.39□□□□□ -0.27
PDE4A-202ENST00000344979 LEPROTO15243 131 aa13.39□□□□□ -0.27
PDE4A-202ENST00000344979 Q6ZSN1 163 aa13.39□□□□□ -0.27
PDE4A-202ENST00000344979 RNF152Q8N8N0 203 aa13.38□□□□□ -0.27
PDE4A-202ENST00000344979 WNK1Q9H4A3 2382 aa13.38□□□□□ -0.27
PDE4A-202ENST00000344979 H7C2G1 150 aa13.38□□□□□ -0.27
PDE4A-202ENST00000344979 Q5PR19 223 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms