RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 LINC01587Q99440 93 aa11.62□□□□□ -0.55
CCDC144A-202ENST00000340621 GCN1Q92616 2671 aaKnown RBP11.62□□□□□ -0.55
CCDC144A-202ENST00000340621 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
CCDC144A-202ENST00000340621 MAPKAPK5-AS1Q8N8E1 139 aa11.62□□□□□ -0.55
CCDC144A-202ENST00000340621 PROK1P58294 105 aa11.61□□□□□ -0.55
CCDC144A-202ENST00000340621 HSD52Q0P140 79 aa11.61□□□□□ -0.55
CCDC144A-202ENST00000340621 FASNP49327 2511 aaKnown RBP11.61□□□□□ -0.55
CCDC144A-202ENST00000340621 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 SEC11AP67812 179 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 M0R2P5 195 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 RIPPLY3P57055 190 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 XCL2Q9UBD3 114 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 WNK1Q9H4A3 2382 aa11.6□□□□□ -0.55
CCDC144A-202ENST00000340621 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 CCL25O15444 150 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 INSP01308 110 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 P0DMU3 169 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 FAM231AP0DMU4 169 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 FAM231CP0DMU5 169 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 HILS1P60008 231 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 C11orf72Q8NBR9 251 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
CCDC144A-202ENST00000340621 LINC01549A6NIU2 74 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 ZNF415Q09FC8 603 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 UFSP1Q6NVU6 142 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 STHQ8IWL8 128 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 CLUHP3Q96NS8 147 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 UBE2V1Q13404 147 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 CST9LQ9H4G1 147 aa11.58□□□□□ -0.56
CCDC144A-202ENST00000340621 HECTD1Q9ULT8 2610 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 I3L3M4 83 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 PTTG1IPP53801 180 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 VAMP3Q15836 100 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 Q6ZSN1 163 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 TIMM17AQ99595 171 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 CHAC1Q9BUX1 264 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 Q9UF83 564 aa11.57□□□□□ -0.56
CCDC144A-202ENST00000340621 A8MWV9 139 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 AZU1P20160 251 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 PMVKQ15126 192 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 EMP1P54849 157 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
CCDC144A-202ENST00000340621 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 A6NDN8 102 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 ADARB2-AS1A8MUL3 147 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 SAP30O75446 220 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 RHOHQ15669 191 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 C1orf158Q8N1D5 194 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 PTH2Q96A98 100 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 K7EP13 123 aa11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 MRPL16Q9NX20 251 aaKnown RBP11.55□□□□□ -0.56
CCDC144A-202ENST00000340621 IGHV3OR16-12A0A075B7B8 117 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 C11orf86A6NJI1 115 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 GCSHP23434 173 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 AMMECR1LQ6DCA0 310 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 OR11H2Q8NH07 326 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 SPXQ9BT56 116 aa11.54□□□□□ -0.56
CCDC144A-202ENST00000340621 E9PLD3 99 aa11.53□□□□□ -0.56
CCDC144A-202ENST00000340621 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
CCDC144A-202ENST00000340621 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
CCDC144A-202ENST00000340621 SETXQ7Z333 2677 aaKnown RBP11.53□□□□□ -0.56
CCDC144A-202ENST00000340621 H3BRM9 83 aa11.52□□□□□ -0.56
CCDC144A-202ENST00000340621 NDUFA7O95182 113 aa11.52□□□□□ -0.56
CCDC144A-202ENST00000340621 FXYD2P54710 66 aa11.52□□□□□ -0.56
CCDC144A-202ENST00000340621 TNFRSF18Q9Y5U5 241 aa11.52□□□□□ -0.56
CCDC144A-202ENST00000340621 MYMXA0A1B0GTQ4 84 aa11.52□□□□□ -0.57
CCDC144A-202ENST00000340621 LY6G6DO95868 133 aa11.52□□□□□ -0.57
CCDC144A-202ENST00000340621 OTOGQ6ZRI0 2925 aa11.52□□□□□ -0.57
CCDC144A-202ENST00000340621 HIVEP2P31629 2446 aa11.52□□□□□ -0.57
CCDC144A-202ENST00000340621 ZNRF2Q8NHG8 242 aa11.51□□□□□ -0.57
CCDC144A-202ENST00000340621 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
CCDC144A-202ENST00000340621 IGLV1-51P01701 117 aa11.51□□□□□ -0.57
CCDC144A-202ENST00000340621 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
CCDC144A-202ENST00000340621 PAPPA-AS1Q5QFB9 102 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 CEND1Q8N111 149 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 WFDC10AQ9H1F0 79 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 RS1O15537 224 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 KRTAP10-3P60369 221 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 TM2D2Q9BX73 214 aa11.5□□□□□ -0.57
CCDC144A-202ENST00000340621 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
CCDC144A-202ENST00000340621 NAA38Q9BRA0 125 aaKnown RBP11.49□□□□□ -0.57
CCDC144A-202ENST00000340621 RHODO00212 210 aa11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 IGHV3-53P01767 116 aa11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 H3BUT2 72 aa11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
CCDC144A-202ENST00000340621 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms