RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 MGPP08493 103 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 UBE2E1P51965 193 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 HERVK_113P63121 156 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 FAM19A5Q7Z5A7 132 aaPredicted RBP11.53□□□□□ -0.56
LIMK2-203ENST00000340552 C3orf22Q8N5N4 141 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 ABCA2Q9BZC7 2435 aa11.53□□□□□ -0.56
LIMK2-203ENST00000340552 RPL39P62891 51 aaKnown RBP11.52□□□□□ -0.56
LIMK2-203ENST00000340552 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.57
LIMK2-203ENST00000340552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
LIMK2-203ENST00000340552 C10orf105Q8TEF2 133 aa11.52□□□□□ -0.57
LIMK2-203ENST00000340552 SPXQ9BT56 116 aa11.52□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV4-61A0A0C4DH41 118 aa11.51□□□□□ -0.57
LIMK2-203ENST00000340552 PRR9Q5T870 116 aa11.51□□□□□ -0.57
LIMK2-203ENST00000340552 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
LIMK2-203ENST00000340552 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
LIMK2-203ENST00000340552 CTSGP08311 255 aa11.51□□□□□ -0.57
LIMK2-203ENST00000340552 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-203ENST00000340552 H3BT86 120 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 DEFB121Q5J5C9 76 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 LRRK2Q5S007 2527 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 SAA4P35542 130 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 GPHB5Q86YW7 130 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 Q8N6K4 173 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 METTL26Q96S19 204 aa11.5□□□□□ -0.57
LIMK2-203ENST00000340552 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 J3KT08 172 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 ZNF876PQ49A33 203 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 CLEC2BQ92478 149 aa11.49□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV4-30-2A0A087WSY4 118 aa11.48□□□□□ -0.57
LIMK2-203ENST00000340552 UQCRQO14949 82 aa11.48□□□□□ -0.57
LIMK2-203ENST00000340552 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
LIMK2-203ENST00000340552 MUC4Q99102 2169 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 IGF1P05019 195 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 LEPROTO15243 131 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 LINC00527Q9UJ94 153 aa11.47□□□□□ -0.57
LIMK2-203ENST00000340552 UBR5O95071 2799 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-203ENST00000340552 BUB3O43684 328 aa11.46□□□□□ -0.57
LIMK2-203ENST00000340552 NDPQ00604 133 aa11.46□□□□□ -0.58
LIMK2-203ENST00000340552 Q6ZSV7 163 aa11.46□□□□□ -0.58
LIMK2-203ENST00000340552 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.58
LIMK2-203ENST00000340552 TMEM141Q96I45 108 aa11.46□□□□□ -0.58
LIMK2-203ENST00000340552 A0A1B0GX51 115 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 EDA2RQ9HAV5 297 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 Q8N9W7 124 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
LIMK2-203ENST00000340552 MAP1AP78559 2803 aaPredicted RBP11.44□□□□□ -0.58
LIMK2-203ENST00000340552 PRRC2AP48634 2157 aaKnown RBP11.44□□□□□ -0.58
LIMK2-203ENST00000340552 WIPF1O43516 503 aa11.44□□□□□ -0.58
LIMK2-203ENST00000340552 S100A4P26447 101 aaKnown RBP11.44□□□□□ -0.58
LIMK2-203ENST00000340552 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
LIMK2-203ENST00000340552 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
LIMK2-203ENST00000340552 A0A0J9YXY3 114 aa11.44□□□□□ -0.58
LIMK2-203ENST00000340552 LST1O00453 97 aa11.44□□□□□ -0.58
LIMK2-203ENST00000340552 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
LIMK2-203ENST00000340552 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
LIMK2-203ENST00000340552 IGHV7-81A0A0B4J1V7 117 aa11.43□□□□□ -0.58
LIMK2-203ENST00000340552 CELSR2Q9HCU4 2923 aa11.43□□□□□ -0.58
LIMK2-203ENST00000340552 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
LIMK2-203ENST00000340552 PF4V1P10720 104 aa11.42□□□□□ -0.58
LIMK2-203ENST00000340552 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
LIMK2-203ENST00000340552 POLR2KP53803 58 aaKnown RBP11.42□□□□□ -0.58
LIMK2-203ENST00000340552 LITAFQ99732 161 aa11.42□□□□□ -0.58
LIMK2-203ENST00000340552 CSMD2Q7Z408 3487 aa11.42□□□□□ -0.58
LIMK2-203ENST00000340552 PPP1R17O96001 155 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 MSMBP08118 114 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 COX6CP09669 75 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 DSCR9P59020 149 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 BRD3OSQ6XYD6 125 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 ANKRD17O75179 2603 aaKnown RBP11.41□□□□□ -0.58
LIMK2-203ENST00000340552 CELSR1Q9NYQ6 3014 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 ZFHX3Q15911 3703 aa11.41□□□□□ -0.58
LIMK2-203ENST00000340552 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 PRSS2P07478 247 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 LINC00315P59091 139 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 CENPEQ02224 2701 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 A0A0J9YX75 114 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 I3L3M4 83 aa11.4□□□□□ -0.58
LIMK2-203ENST00000340552 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
LIMK2-203ENST00000340552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.4□□□□□ -0.591e-6■■■■□ 21.4
LIMK2-203ENST00000340552 FBN2P35556 2912 aa11.4□□□□□ -0.59
LIMK2-203ENST00000340552 COX7CP15954 63 aa11.39□□□□□ -0.59
LIMK2-203ENST00000340552 PTPN13Q12923 2485 aa11.39□□□□□ -0.59
LIMK2-203ENST00000340552 POLQO75417 2590 aa11.39□□□□□ -0.59
LIMK2-203ENST00000340552 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms