RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 IGHV3-30-3P0DP02 117 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 TMEM97Q5BJF2 176 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 TSKUQ8WUA8 353 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 PGLYRP4Q96LB8 373 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 GFRA4Q9GZZ7 299 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
SYNE4-202ENST00000340477 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
SYNE4-202ENST00000340477 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
SYNE4-202ENST00000340477 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
SYNE4-202ENST00000340477 DAZ4Q86SG3 579 aaKnown RBP13.01□□□□□ -0.33
SYNE4-202ENST00000340477 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
SYNE4-202ENST00000340477 DAZ3Q9NR90 486 aaKnown RBP13.01□□□□□ -0.33
SYNE4-202ENST00000340477 FAM231BA6NCW3 169 aa13□□□□□ -0.33
SYNE4-202ENST00000340477 C9JQL5 133 aa13□□□□□ -0.33
SYNE4-202ENST00000340477 EREGO14944 169 aa13□□□□□ -0.33
SYNE4-202ENST00000340477 RASL11AQ6T310 242 aa12.99□□□□□ -0.33
SYNE4-202ENST00000340477 A0A087WX48 190 aa12.98□□□□□ -0.33
SYNE4-202ENST00000340477 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
SYNE4-202ENST00000340477 M0QY20 66 aa12.98□□□□□ -0.33
SYNE4-202ENST00000340477 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
SYNE4-202ENST00000340477 PKIAP61925 76 aa12.98□□□□□ -0.33
SYNE4-202ENST00000340477 LAGE3Q14657 143 aa12.98□□□□□ -0.33
SYNE4-202ENST00000340477 BIRC6Q9NR09 4857 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 TRBV6-8A0A0A6YYG3 113 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 A0A1B0GUT8 65 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 IBA57-AS1B1ANH7 110 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 PSCAO43653 123 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 CHCHD7Q9BUK0 85 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 V9GYV3 84 aa12.97□□□□□ -0.33
SYNE4-202ENST00000340477 ELOBQ15370 118 aa12.96□□□□□ -0.33
SYNE4-202ENST00000340477 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
SYNE4-202ENST00000340477 Q6ZRN7 208 aaPredicted RBP12.96□□□□□ -0.33
SYNE4-202ENST00000340477 Q9HAA7 133 aa12.96□□□□□ -0.33
SYNE4-202ENST00000340477 NIT2Q9NQR4 276 aa12.96□□□□□ -0.33
SYNE4-202ENST00000340477 NIT1Q86X76 327 aa12.95□□□□□ -0.34
SYNE4-202ENST00000340477 FRZBQ92765 325 aa12.95□□□□□ -0.34
SYNE4-202ENST00000340477 CHCHD5Q9BSY4 110 aa12.95□□□□□ -0.34
SYNE4-202ENST00000340477 NAT8BQ9UHF3 227 aa12.95□□□□□ -0.34
SYNE4-202ENST00000340477 TRBV25-1A0A075B6N4 114 aa12.94□□□□□ -0.34
SYNE4-202ENST00000340477 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
SYNE4-202ENST00000340477 RIGQ13278 110 aa12.94□□□□□ -0.34
SYNE4-202ENST00000340477 TRAV8-3A0A0A6YYJ7 113 aa12.93□□□□□ -0.34
SYNE4-202ENST00000340477 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
SYNE4-202ENST00000340477 RMI2Q96E14 147 aa12.92□□□□□ -0.34
SYNE4-202ENST00000340477 PKD1P98161 4303 aa12.91□□□□□ -0.34
SYNE4-202ENST00000340477 TRAV26-2A0A0B4J265 109 aa12.91□□□□□ -0.34
SYNE4-202ENST00000340477 IGHV1-24A0A0C4DH33 117 aa12.91□□□□□ -0.34
SYNE4-202ENST00000340477 Q8N3U1 123 aa12.91□□□□□ -0.34
SYNE4-202ENST00000340477 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
SYNE4-202ENST00000340477 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
SYNE4-202ENST00000340477 PNRC1Q12796 327 aaPredicted RBP12.9□□□□□ -0.34
SYNE4-202ENST00000340477 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
SYNE4-202ENST00000340477 GATD1Q8NB37 220 aa12.9□□□□□ -0.34
SYNE4-202ENST00000340477 TMEM191AQ9H0A3 160 aa12.9□□□□□ -0.34
SYNE4-202ENST00000340477 PPP1R2P9O14990 202 aa12.89□□□□□ -0.35
SYNE4-202ENST00000340477 CRPP02741 224 aa12.89□□□□□ -0.35
SYNE4-202ENST00000340477 COTL1Q14019 142 aa12.89□□□□□ -0.35
SYNE4-202ENST00000340477 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
SYNE4-202ENST00000340477 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
SYNE4-202ENST00000340477 A0A1B0GW15 77 aa12.88□□□□□ -0.35
SYNE4-202ENST00000340477 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
SYNE4-202ENST00000340477 IQCJQ1A5X6 159 aa12.88□□□□□ -0.35
SYNE4-202ENST00000340477 A0A087WTM6 91 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 S100A8P05109 93 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 IFITM2Q01629 132 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 Q0VG73 95 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 UBE2WQ96B02 151 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 TMEM243Q9BU79 118 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
SYNE4-202ENST00000340477 UBE2L6O14933 153 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 ANGP03950 147 aaKnown RBP12.86□□□□□ -0.35
SYNE4-202ENST00000340477 AMTP48728 403 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 GAGE6Q13070 117 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 NTM-AS1Q6ZSK4 140 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
SYNE4-202ENST00000340477 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
SYNE4-202ENST00000340477 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
SYNE4-202ENST00000340477 CDPF1Q6NVV7 123 aa12.84□□□□□ -0.35
SYNE4-202ENST00000340477 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
SYNE4-202ENST00000340477 ST20Q9HBF5 79 aa12.84□□□□□ -0.35
SYNE4-202ENST00000340477 IGKV2D-24A0A075B6R9 120 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 NCR2O95944 276 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 PPP1R17O96001 155 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 CAMPP49913 170 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 ATRAIDQ6UW56 229 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
SYNE4-202ENST00000340477 APCSP02743 223 aa12.82□□□□□ -0.36
SYNE4-202ENST00000340477 RAB4AP20338 218 aa12.82□□□□□ -0.36
SYNE4-202ENST00000340477 RBX1P62877 108 aa12.82□□□□□ -0.36
SYNE4-202ENST00000340477 HBBP68871 147 aa12.82□□□□□ -0.36
SYNE4-202ENST00000340477 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms