RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 CCL19Q99731 98 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
CDC42EP4-201ENST00000335793 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 TEX49A0A1B0GTD5 131 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 DAZ1Q9NQZ3 744 aaKnown RBP12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 IGHV4-4A0A075B6R2 117 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 TRBV7-3A0A075B6L6 115 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 SLC25A20O43772 301 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 ZNF56Q15929 161 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 EDA2RQ9HAV5 297 aa12.43□□□□□ -0.42
CDC42EP4-201ENST00000335793 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
CDC42EP4-201ENST00000335793 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
CDC42EP4-201ENST00000335793 PLEKHB2Q96CS7 222 aa12.42□□□□□ -0.42
CDC42EP4-201ENST00000335793 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 HERVK_113P61574 105 aa12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 A4D1N5 150 aa12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 PPP1R17O96001 155 aa12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 DUX5Q96PT3 197 aa12.41□□□□□ -0.42
CDC42EP4-201ENST00000335793 ABCA2Q9BZC7 2435 aa12.4□□□□□ -0.42
CDC42EP4-201ENST00000335793 TRAV12-1A0A0B4J245 112 aa12.4□□□□□ -0.42
CDC42EP4-201ENST00000335793 TAL2Q16559 108 aa12.4□□□□□ -0.43
CDC42EP4-201ENST00000335793 SPXQ9BT56 116 aa12.4□□□□□ -0.43
CDC42EP4-201ENST00000335793 ZFHX3Q15911 3703 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 C10orf126Q8N4M7 172 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 IGHV3-64A0A075B6Q5 118 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 IGHG2P01859 326 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 Q1RN00 199 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 VCX2Q9H322 139 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 C2CD3Q4AC94 2353 aa12.39□□□□□ -0.43
CDC42EP4-201ENST00000335793 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 KLK9Q9UKQ9 250 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 IGHV4-30-2A0A087WSY4 118 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 Q8N1Y9 231 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 NRGNQ92686 78 aa12.38□□□□□ -0.43
CDC42EP4-201ENST00000335793 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
CDC42EP4-201ENST00000335793 VCYO14598 125 aa12.37□□□□□ -0.43
CDC42EP4-201ENST00000335793 C9orf153Q5TBE3 101 aa12.37□□□□□ -0.43
CDC42EP4-201ENST00000335793 SUMO4Q6EEV6 95 aa12.37□□□□□ -0.43
CDC42EP4-201ENST00000335793 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
CDC42EP4-201ENST00000335793 SPINK13Q1W4C9 94 aa12.36□□□□□ -0.43
CDC42EP4-201ENST00000335793 SOCS3O14543 225 aa12.36□□□□□ -0.43
CDC42EP4-201ENST00000335793 C10orf99Q6UWK7 81 aa12.36□□□□□ -0.43
CDC42EP4-201ENST00000335793 MUC4Q99102 2169 aa12.36□□□□□ -0.43
CDC42EP4-201ENST00000335793 MAPK1IP1LQ8NDC0 245 aa12.36□□□□□ -0.43
CDC42EP4-201ENST00000335793 SNRPD3P62318 126 aaKnown RBP12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 MSMBP08118 114 aa12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 PMVKQ15126 192 aa12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 IGHV3-73A0A0B4J1V6 119 aa12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
CDC42EP4-201ENST00000335793 WNK1Q9H4A3 2382 aa12.34□□□□□ -0.43
CDC42EP4-201ENST00000335793 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
CDC42EP4-201ENST00000335793 FAM236AA0A1B0GUQ0 79 aa12.34□□□□□ -0.43
CDC42EP4-201ENST00000335793 FAM236BA0A1B0GV22 79 aa12.34□□□□□ -0.43
CDC42EP4-201ENST00000335793 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
CDC42EP4-201ENST00000335793 A6NDX4 124 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 C10orf105Q8TEF2 133 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 IGHV4-59P01825 116 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 BBC3Q96PG8 261 aaPredicted RBP12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 LINC01587Q99440 93 aa12.33□□□□□ -0.44
CDC42EP4-201ENST00000335793 FLNBO75369 2602 aaKnown RBP12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 UBE2D3P61077 147 aa12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 UBE2D2P62837 147 aa12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 SONP18583 2426 aaKnown RBP12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 C19orf54Q5BKX5 351 aa12.32□□□□□ -0.44
CDC42EP4-201ENST00000335793 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 VPS13CQ709C8 3753 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 AVPP01185 164 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 HERVK_113P63121 156 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 H3BUA1 57 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
CDC42EP4-201ENST00000335793 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
CDC42EP4-201ENST00000335793 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
CDC42EP4-201ENST00000335793 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
CDC42EP4-201ENST00000335793 ELANEP08246 267 aa12.3□□□□□ -0.44
CDC42EP4-201ENST00000335793 NAV2Q8IVL1 2488 aa12.3□□□□□ -0.44
CDC42EP4-201ENST00000335793 CRYGDP07320 174 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms