RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ASCC3Q8N3C0 2202 aaKnown RBP6.31□□□□□ -1.4
TDP1-201ENST00000335725 M0R378 163 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 RPL39P62891 51 aaKnown RBP6.31□□□□□ -1.4
TDP1-201ENST00000335725 Q0VFX4 171 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 GGNQ86UU5 652 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
TDP1-201ENST00000335725 ZNF503-AS2A6NEH8 195 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 RNF223E7ERA6 249 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 NDPQ00604 133 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 HIST2H2BCQ6DN03 193 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 HIST2H2BDQ6DRA6 164 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 Q6ZVQ6 151 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 Q9HAA7 133 aa6.31□□□□□ -1.4
TDP1-201ENST00000335725 IGHV4OR15-8A0A075B7B6 117 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 A0A087WW49 117 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
TDP1-201ENST00000335725 PIK3CD-AS1Q5SR53 167 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 JMJD7-PLA2G4BH0Y9G9 81 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 H0YGX0 51 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 CD28P10747 220 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
TDP1-201ENST00000335725 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 E7EQL1 145 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
TDP1-201ENST00000335725 WFDC9Q8NEX5 89 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 CCL13Q99616 98 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 ZGRF1Q86YA3 2104 aa6.3□□□□□ -1.4
TDP1-201ENST00000335725 IGLV3-12A0A075B6K2 115 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 IGKV1D-17A0A075B6S4 117 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 B3GALT5-AS1P59052 145 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 GPHB5Q86YW7 130 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 RPP25Q9BUL9 199 aaKnown RBP6.29□□□□□ -1.4
TDP1-201ENST00000335725 A0A087WZ39 114 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 TMEM256-PLSCR3K7ERE1 68 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 MED14OSP0DP75 135 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
TDP1-201ENST00000335725 K7EMT4 169 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 SEC16AO15027 2179 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 CCL3P10147 92 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 ECSCRQ19T08 205 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 I3L2K1 104 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 FAM218AQ96MZ4 157 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 ARFGEF3Q5TH69 2177 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 SRRM5B3KS81 715 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 C8orf87E5RJ46 101 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
TDP1-201ENST00000335725 LINC00574Q9H8X3 128 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 CNTRLQ7Z7A1 2325 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 ZNF73O43830 326 aaPredicted RBP6.27□□□□□ -1.41
TDP1-201ENST00000335725 IGLV2-23P01705 113 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 ZNRF1Q8ND25 227 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
TDP1-201ENST00000335725 TRBV7-4A0A0J9YYF1 115 aa6.26□□□□□ -1.41
TDP1-201ENST00000335725 OPRPNQ99935 248 aaPredicted RBP6.26□□□□□ -1.41
TDP1-201ENST00000335725 NDUFA1O15239 70 aa6.26□□□□□ -1.41
TDP1-201ENST00000335725 ORMDL1Q9P0S3 153 aa6.26□□□□□ -1.41
TDP1-201ENST00000335725 EP400Q96L91 3159 aa6.26□□□□□ -1.41
TDP1-201ENST00000335725 SPTY2D1-AS1A0A0U1RR47 76 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 PHF5AQ7RTV0 110 aaKnown RBP6.25□□□□□ -1.41
TDP1-201ENST00000335725 Q8N6K4 173 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 ZNF580Q9UK33 172 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 TRBV6-5A0A0K0K1A5 114 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 NCR3O14931 201 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 PRYO14603 147 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 CRPP02741 224 aa6.25□□□□□ -1.41
TDP1-201ENST00000335725 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
TDP1-201ENST00000335725 LENEPQ9Y5L5 61 aa6.24□□□□□ -1.41
TDP1-201ENST00000335725 SVILO95425 2214 aa6.24□□□□□ -1.41
TDP1-201ENST00000335725 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
TDP1-201ENST00000335725 UBE2AP49459 152 aa6.24□□□□□ -1.41
TDP1-201ENST00000335725 CLEC19AQ6UXS0 136 aa6.24□□□□□ -1.41
TDP1-201ENST00000335725 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 TRAV10A0A0B4J240 114 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 APELAP0DMC3 54 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 MIR7-3HGQ8N6C7 128 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 F5H697 171 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 LCA10Q71F78 164 aa6.23□□□□□ -1.41
TDP1-201ENST00000335725 hDV103S1A0JD37 113 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 NREPQ16612 68 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
TDP1-201ENST00000335725 ATP11AUNQ6ZP68 121 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 Q6ZTC4 211 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 K7EIM0 57 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 PRR14LQ5THK1 2151 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 CXCL6P80162 114 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 IGFL4Q6B9Z1 124 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 Q6ZRP5 223 aa6.22□□□□□ -1.41
TDP1-201ENST00000335725 PSPHP1O15172 72 aa6.21□□□□□ -1.41
TDP1-201ENST00000335725 C9orf47Q6ZRZ4 202 aa6.21□□□□□ -1.41
TDP1-201ENST00000335725 EPOPA6NHQ4 379 aa6.21□□□□□ -1.42
TDP1-201ENST00000335725 PRAC2D3DTV9 90 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms