RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
SF1-202ENST00000334944 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
SF1-202ENST00000334944 NOTCH3Q9UM47 2321 aa10.43□□□□□ -0.74
SF1-202ENST00000334944 IGHV7-4-1A0A0J9YVY3 117 aa10.43□□□□□ -0.74
SF1-202ENST00000334944 KLK9Q2XQG4 91 aa10.43□□□□□ -0.74
SF1-202ENST00000334944 BBC3Q96PG8 261 aaPredicted RBP10.43□□□□□ -0.74
SF1-202ENST00000334944 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
SF1-202ENST00000334944 RBAKDNA6NC62 111 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SF1-202ENST00000334944 NRACQ8N912 160 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
SF1-202ENST00000334944 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 B4DSR2 109 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 C9orf47Q6ZRZ4 202 aa10.42□□□□□ -0.74
SF1-202ENST00000334944 VCX2Q9H322 139 aa10.41□□□□□ -0.74
SF1-202ENST00000334944 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
SF1-202ENST00000334944 NDUFA4O00483 81 aa10.41□□□□□ -0.74
SF1-202ENST00000334944 WNK1Q9H4A3 2382 aa10.41□□□□□ -0.74
SF1-202ENST00000334944 GNRH2O43555 120 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 KRTAP10-9P60411 292 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 Q1RN00 199 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 SBSPONQ8IVN8 264 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 C10orf126Q8N4M7 172 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.74
SF1-202ENST00000334944 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 NBPF19A0A087WUL8 3843 aa10.4□□□□□ -0.74
SF1-202ENST00000334944 PRRC2AP48634 2157 aaKnown RBP10.4□□□□□ -0.75
SF1-202ENST00000334944 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
SF1-202ENST00000334944 LYRM7Q5U5X0 104 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 ACANP16112 2415 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 TSPEAR-AS2P59090 65 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 A0A0J9YY99 117 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 C14orf178Q8N769 122 aaPredicted RBP10.39□□□□□ -0.75
SF1-202ENST00000334944 BAALCQ8WXS3 180 aa10.39□□□□□ -0.75
SF1-202ENST00000334944 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
SF1-202ENST00000334944 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 ZNF56Q15929 161 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 PRO1854Q9UHT4 67 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 APCP25054 2843 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 SOCS3O14543 225 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
SF1-202ENST00000334944 NEXN-AS1Q8NBZ9 246 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
SF1-202ENST00000334944 C11orf86A6NJI1 115 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 COX6B1P14854 86 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 KLK5Q9Y337 293 aaPredicted RBP10.37□□□□□ -0.75
SF1-202ENST00000334944 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 A4D1N5 150 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 IGLV1-40P01703 118 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
SF1-202ENST00000334944 MTORP42345 2549 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 MGPP08493 103 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 C2orf66Q6UXQ4 117 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
SF1-202ENST00000334944 LINC01619G3V211 115 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 ASIPP42127 132 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 SRSF2Q01130 221 aaKnown RBP10.36□□□□□ -0.75
SF1-202ENST00000334944 MUC4Q99102 2169 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 SMIM2Q9BVW6 85 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 CHD6Q8TD26 2715 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 IGHV3-30P01768 117 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 IGHV3-30-5P0DP03 117 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 TMEM170BQ5T4T1 132 aa10.36□□□□□ -0.75
SF1-202ENST00000334944 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
SF1-202ENST00000334944 DUSP14O95147 198 aaKnown RBP10.35□□□□□ -0.75
SF1-202ENST00000334944 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
SF1-202ENST00000334944 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
SF1-202ENST00000334944 JPT2Q9H910 190 aa10.35□□□□□ -0.75
SF1-202ENST00000334944 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
SF1-202ENST00000334944 NIPBLQ6KC79 2804 aaeCLIP10.34□□□□□ -0.75
SF1-202ENST00000334944 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
SF1-202ENST00000334944 LINC00477Q96M19 166 aa10.34□□□□□ -0.75
SF1-202ENST00000334944 SYNJ2BPP57105 145 aa10.34□□□□□ -0.75
SF1-202ENST00000334944 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
SF1-202ENST00000334944 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
SF1-202ENST00000334944 LINC01587Q99440 93 aa10.34□□□□□ -0.75
SF1-202ENST00000334944 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
SF1-202ENST00000334944 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 TRAV21A0A0B4J279 112 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 OVOL1O14753 267 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 CFHR3Q02985 330 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 DEFB136Q30KP8 78 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
SF1-202ENST00000334944 PSMB8P28062 276 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 CSDC2Q9Y534 153 aaKnown RBP10.32□□□□□ -0.76
SF1-202ENST00000334944 CRYGDP07320 174 aa10.32□□□□□ -0.76
SF1-202ENST00000334944 ZNF22P17026 224 aaPredicted RBP10.32□□□□□ -0.76
SF1-202ENST00000334944 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
SF1-202ENST00000334944 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms