RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 Q8N976 141 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 GNRH2O43555 120 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 ADGRG4Q8IZF6 3080 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 ODF1Q14990 250 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 PTH2Q96A98 100 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 B5MCH6 92 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 SLC25A20O43772 301 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 DEFB131AP59861 70 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 GCN1Q92616 2671 aaKnown RBP8.99□□□□□ -0.97
HDAC6-201ENST00000334136 TAL2Q16559 108 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 NTN5Q8WTR8 489 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-201ENST00000334136 C4orf3Q8WVX3 66 aa8.99□□□□□ -0.97
HDAC6-201ENST00000334136 RNASE13Q5GAN3 156 aaKnown RBP8.98□□□□□ -0.97
HDAC6-201ENST00000334136 KLK9Q9UKQ9 250 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 ATRQ13535 2644 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 TRBV12-3P01733 135 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 DEFB1P60022 68 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 SPINK13Q1W4C9 94 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 A0A096LNT2 108 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 J3QQQ9 107 aa8.98□□□□□ -0.97
HDAC6-201ENST00000334136 GPHB5Q86YW7 130 aa8.97□□□□□ -0.97
HDAC6-201ENST00000334136 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
HDAC6-201ENST00000334136 ZNF80P51504 273 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-201ENST00000334136 NDUFA11Q86Y39 141 aa8.97□□□□□ -0.97
HDAC6-201ENST00000334136 IGKV2D-26A0A0A0MRZ7 120 aa8.96□□□□□ -0.97
HDAC6-201ENST00000334136 C20orf78Q9BR46 151 aa8.96□□□□□ -0.97
HDAC6-201ENST00000334136 TRGV2A0A075B6R0 118 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 IGHV3-53P01767 116 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
HDAC6-201ENST00000334136 C9orf66Q5T8R8 295 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 CFAP47Q6ZTR5 3102 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 CCDC140Q96MF4 163 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.98
HDAC6-201ENST00000334136 NDUFA7O95182 113 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 HIST2H2BDQ6DRA6 164 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 KRTAP1-3Q8IUG1 177 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 ITPR2Q14571 2701 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 PSMB8P28062 276 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 SPAG8Q99932 426 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-201ENST00000334136 ESM1Q9NQ30 184 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 TRAV26-1A0A087WT03 109 aa8.95□□□□□ -0.98
HDAC6-201ENST00000334136 TRGV11A0A075B6L2 103 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 H3BMM0 161 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 UBE2WQ96B02 151 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 C2orf91Q6ZV80 131 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 IGHV3-16A0A0C4DH30 117 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 CRIP1P50238 77 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 PRIMA1Q86XR5 153 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 K7EMT4 169 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 LINC00158P58513 81 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 UNQ9165/PRO28630Q6UXU0 137 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
HDAC6-201ENST00000334136 HIGD1BQ9P298 99 aa8.94□□□□□ -0.98
HDAC6-201ENST00000334136 IGHV3-38A0A0C4DH36 116 aa8.93□□□□□ -0.98
HDAC6-201ENST00000334136 BUB3O43684 328 aa8.93□□□□□ -0.98
HDAC6-201ENST00000334136 RPL39P62891 51 aaKnown RBP8.93□□□□□ -0.98
HDAC6-201ENST00000334136 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
HDAC6-201ENST00000334136 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
HDAC6-201ENST00000334136 MORN3Q6PF18 240 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-201ENST00000334136 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 IGLV1-40P01703 118 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 FOXI1Q12951 378 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 A4D1N5 150 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 FSHBP01225 129 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 CFC1P0CG37 223 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
HDAC6-201ENST00000334136 ZNF493Q6ZR52 646 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
HDAC6-201ENST00000334136 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE2AQ6NT46 116 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 RS1O15537 224 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 IFITM1P13164 125 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 WI2-2373I1.2A0A1W2PRP0 233 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 TEN1Q86WV5 123 aa8.91□□□□□ -0.98
HDAC6-201ENST00000334136 PAX4O43316 350 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE12JA6NER3 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE7O76087 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE12FP0CL80 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE12GP0CL81 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE12IP0CL82 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 CRYBA4P53673 196 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 GAGE4Q13068 117 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 CHCHD5Q9BSY4 110 aa8.9□□□□□ -0.98
HDAC6-201ENST00000334136 A0A0J9YXV3 536 aa8.9□□□□□ -0.99
HDAC6-201ENST00000334136 C16orf54Q6UWD8 224 aa8.9□□□□□ -0.99
HDAC6-201ENST00000334136 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.99
HDAC6-201ENST00000334136 CARD19Q96LW7 228 aa8.9□□□□□ -0.99
HDAC6-201ENST00000334136 C11orf86A6NJI1 115 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms