RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 H7C1H1 209 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 ZNF56Q15929 161 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 ZNF876PQ49A33 203 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 NEXN-AS1Q8NBZ9 246 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 CUBNO60494 3623 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 VCYO14598 125 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 CD300EQ496F6 205 aaPredicted RBP12.8□□□□□ -0.36
DDX28-201ENST00000332395 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 RAX2Q96IS3 184 aa12.8□□□□□ -0.36
DDX28-201ENST00000332395 TRBV6-5A0A0K0K1A5 114 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 SDHAF1A6NFY7 115 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 BAALCQ8WXS3 180 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 TTTY13Q9BZ97 58 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 YAE1D1Q9NRH1 226 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 KMT2BQ9UMN6 2715 aaPredicted RBP12.79□□□□□ -0.36
DDX28-201ENST00000332395 M0QY20 66 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 SCGB1A1P11684 91 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 HTN1P15515 57 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 ZFP2Q6ZN57 461 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 KIR2DL4Q99706 377 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 CYSLTR1Q9Y271 337 aa12.79□□□□□ -0.36
DDX28-201ENST00000332395 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
DDX28-201ENST00000332395 K7ERJ3 54 aa12.78□□□□□ -0.36
DDX28-201ENST00000332395 CEND1Q8N111 149 aa12.78□□□□□ -0.36
DDX28-201ENST00000332395 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.36
DDX28-201ENST00000332395 A0A1W2PRX2 142 aa12.77□□□□□ -0.36
DDX28-201ENST00000332395 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.36
DDX28-201ENST00000332395 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.36
DDX28-201ENST00000332395 NF1P21359 2839 aa12.77□□□□□ -0.37
DDX28-201ENST00000332395 CD28P10747 220 aa12.77□□□□□ -0.37
DDX28-201ENST00000332395 FHL3Q13643 280 aa12.77□□□□□ -0.37
DDX28-201ENST00000332395 MORN3Q6PF18 240 aaPredicted RBP12.77□□□□□ -0.37
DDX28-201ENST00000332395 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.37
DDX28-201ENST00000332395 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
DDX28-201ENST00000332395 E9PLD3 99 aa12.76□□□□□ -0.37
DDX28-201ENST00000332395 NHP2Q9NX24 153 aaKnown RBP12.76□□□□□ -0.37
DDX28-201ENST00000332395 LINC01549A6NIU2 74 aa12.75□□□□□ -0.37
DDX28-201ENST00000332395 CCL24O00175 119 aa12.75□□□□□ -0.37
DDX28-201ENST00000332395 AZU1P20160 251 aa12.75□□□□□ -0.37
DDX28-201ENST00000332395 TRPT1Q86TN4 253 aaKnown RBP12.75□□□□□ -0.37
DDX28-201ENST00000332395 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
DDX28-201ENST00000332395 ANK3Q12955 4377 aaKnown RBP12.74□□□□□ -0.37
DDX28-201ENST00000332395 PRSS29PA6NIE9 313 aa12.74□□□□□ -0.37
DDX28-201ENST00000332395 F8W1H4 67 aa12.74□□□□□ -0.37
DDX28-201ENST00000332395 SPANXB1Q9NS25 103 aaPredicted RBP12.74□□□□□ -0.37
DDX28-201ENST00000332395 IGLL5B9A064 214 aa12.74□□□□□ -0.37
DDX28-201ENST00000332395 PRM2P04554 102 aa12.74□□□□□ -0.37
DDX28-201ENST00000332395 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
DDX28-201ENST00000332395 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
DDX28-201ENST00000332395 ITPR2Q14571 2701 aa12.74□□□□□ -0.37
DDX28-201ENST00000332395 HELZ2Q9BYK8 2649 aaKnown RBP12.73□□□□□ -0.37
DDX28-201ENST00000332395 IGIPA6NJ69 53 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 TSHBP01222 138 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
DDX28-201ENST00000332395 LINC01006Q8NI28 216 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 TRAV25A0A0B4J276 109 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 TAL2Q16559 108 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
DDX28-201ENST00000332395 ACANP16112 2415 aa12.72□□□□□ -0.37
DDX28-201ENST00000332395 ODF3L2Q3SX64 289 aa12.72□□□□□ -0.37
DDX28-201ENST00000332395 WFDC2Q14508 124 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 C16orf95Q9H693 158 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.37
DDX28-201ENST00000332395 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 M0R2P5 195 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 ZNF415Q09FC8 603 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 TMEM141Q96I45 108 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 ZNF479Q96JC4 524 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 TIMM17AQ99595 171 aa12.71□□□□□ -0.37
DDX28-201ENST00000332395 A6NJY4 79 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 J3QR89 54 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 INSP01308 110 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 LINC01587Q99440 93 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 C12orf74Q32Q52 190 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 SPATA25Q9BR10 227 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 UNC79Q9P2D8 2635 aa12.7□□□□□ -0.38
DDX28-201ENST00000332395 SMAGPQ0VAQ4 97 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 PMVKQ15126 192 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 RHOHQ15669 191 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 LINC00467Q9BRT7 94 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 IGHV3-73A0A0B4J1V6 119 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 A8MWV9 139 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 OR11H12B2RN74 326 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
DDX28-201ENST00000332395 I3L3M4 83 aa12.68□□□□□ -0.38
DDX28-201ENST00000332395 WNK1Q9H4A3 2382 aa12.68□□□□□ -0.38
DDX28-201ENST00000332395 IGLV4-69A0A075B6H9 119 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 STHQ8IWL8 128 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 H3BMG7 143 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 P0DMU3 169 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 FAM231AP0DMU4 169 aa12.67□□□□□ -0.38
DDX28-201ENST00000332395 FAM231CP0DMU5 169 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms