RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 UBE2D3P61077 147 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 UBE2D2P62837 147 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
LRRC28-202ENST00000331450 KCNIP4Q6PIL6 250 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 RASL11AQ6T310 242 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 LYPD5Q6UWN5 251 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
LRRC28-202ENST00000331450 BTF3L4Q96K17 158 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
LRRC28-202ENST00000331450 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
LRRC28-202ENST00000331450 TRAV26-2A0A0B4J265 109 aa11.04□□□□□ -0.64
LRRC28-202ENST00000331450 ATP6V0E2Q8NHE4 81 aa11.04□□□□□ -0.64
LRRC28-202ENST00000331450 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
LRRC28-202ENST00000331450 LYSTQ99698 3801 aa11.04□□□□□ -0.64
LRRC28-202ENST00000331450 FAM104BQ5XKR9 115 aa11.03□□□□□ -0.64
LRRC28-202ENST00000331450 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
LRRC28-202ENST00000331450 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
LRRC28-202ENST00000331450 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
LRRC28-202ENST00000331450 MRAP2Q96G30 205 aa11.02□□□□□ -0.65
LRRC28-202ENST00000331450 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
LRRC28-202ENST00000331450 NIT2Q9NQR4 276 aa11.02□□□□□ -0.65
LRRC28-202ENST00000331450 GAS8-AS1O95177 125 aa11.01□□□□□ -0.65
LRRC28-202ENST00000331450 S100PP25815 95 aa11.01□□□□□ -0.65
LRRC28-202ENST00000331450 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
LRRC28-202ENST00000331450 URGCP-MRPS24S4R325 110 aa11.01□□□□□ -0.65
LRRC28-202ENST00000331450 MRPL51Q4U2R6 128 aaKnown RBP11□□□□□ -0.65
LRRC28-202ENST00000331450 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
LRRC28-202ENST00000331450 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
LRRC28-202ENST00000331450 RPS10P46783 165 aaKnown RBP10.99□□□□□ -0.65
LRRC28-202ENST00000331450 TNFRSF18Q9Y5U5 241 aa10.99□□□□□ -0.65
LRRC28-202ENST00000331450 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
LRRC28-202ENST00000331450 VPS13DQ5THJ4 4388 aa10.98□□□□□ -0.65
LRRC28-202ENST00000331450 NCR2O95944 276 aa10.98□□□□□ -0.65
LRRC28-202ENST00000331450 LELP1Q5T871 98 aa10.98□□□□□ -0.65
LRRC28-202ENST00000331450 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
LRRC28-202ENST00000331450 NRACQ8N912 160 aa10.98□□□□□ -0.65
LRRC28-202ENST00000331450 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
LRRC28-202ENST00000331450 IGHV3-38A0A0C4DH36 116 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 ELOBQ15370 118 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 OR10J3Q5JRS4 329 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
LRRC28-202ENST00000331450 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
LRRC28-202ENST00000331450 D6R8Y8 96 aa10.95□□□□□ -0.66
LRRC28-202ENST00000331450 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
LRRC28-202ENST00000331450 Q9H8V8 135 aa10.95□□□□□ -0.66
LRRC28-202ENST00000331450 SACSQ9NZJ4 4579 aa10.95□□□□□ -0.66
LRRC28-202ENST00000331450 TRBV6-8A0A0A6YYG3 113 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 TGIF2-C20orf24A0A0A6YYL0 155 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 SDHAF1A6NFY7 115 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 SIVA1O15304 175 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 PPP1R17O96001 155 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 HLA-DQA1P01909 254 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 PPBPP02775 128 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 CKS2P33552 79 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
LRRC28-202ENST00000331450 COX19Q49B96 90 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-202ENST00000331450 TMEM70Q9BUB7 260 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 GNB1LQ9BYB4 327 aa10.94□□□□□ -0.66
LRRC28-202ENST00000331450 IGLV2-18A0A075B6J9 118 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 TRAV8-6A0A0B4J262 113 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 DNAH10OSP0CZ25 163 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 Q6ZR54 194 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 ST20Q9HBF5 79 aa10.93□□□□□ -0.66
LRRC28-202ENST00000331450 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 PHOX2AO14813 284 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 NPYP01303 97 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
LRRC28-202ENST00000331450 IQCJQ1A5X6 159 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 ORMDL3Q8N138 153 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
LRRC28-202ENST00000331450 NBDYA0A0U1RRE5 68 aa10.91□□□□□ -0.66
LRRC28-202ENST00000331450 MT-ND6P03923 174 aa10.91□□□□□ -0.66
LRRC28-202ENST00000331450 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
LRRC28-202ENST00000331450 C20orf78Q9BR46 151 aa10.91□□□□□ -0.66
LRRC28-202ENST00000331450 COTL1Q14019 142 aa10.9□□□□□ -0.66
LRRC28-202ENST00000331450 LINC01556Q5JQF7 62 aa10.9□□□□□ -0.66
LRRC28-202ENST00000331450 PRELID3AQ96N28 172 aa10.9□□□□□ -0.66
LRRC28-202ENST00000331450 LAMTOR2Q9Y2Q5 125 aa10.9□□□□□ -0.66
LRRC28-202ENST00000331450 RYR2Q92736 4967 aa10.9□□□□□ -0.66
LRRC28-202ENST00000331450 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 I3L3M4 83 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 TSHBP01222 138 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 NIT1Q86X76 327 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 HYDINQ4G0P3 5121 aa10.89□□□□□ -0.67
LRRC28-202ENST00000331450 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
LRRC28-202ENST00000331450 K7EP13 123 aa10.88□□□□□ -0.67
LRRC28-202ENST00000331450 M0R2N4 97 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms