RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
BRF1-201ENST00000327359 TMEM170BQ5T4T1 132 aa12□□□□□ -0.49
BRF1-201ENST00000327359 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
BRF1-201ENST00000327359 LINC00477Q96M19 166 aa12□□□□□ -0.49
BRF1-201ENST00000327359 AMELXQ99217 191 aa12□□□□□ -0.49
BRF1-201ENST00000327359 RNASE4P34096 147 aaKnown RBP12□□□□□ -0.49
BRF1-201ENST00000327359 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
BRF1-201ENST00000327359 MUC4Q99102 2169 aa12□□□□□ -0.49
BRF1-201ENST00000327359 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
BRF1-201ENST00000327359 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
BRF1-201ENST00000327359 AVPP01185 164 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 TRPT1Q86TN4 253 aaKnown RBP11.99□□□□□ -0.49
BRF1-201ENST00000327359 LINC01600Q96MT4 127 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 MOB4Q9Y3A3 225 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 EPG5Q9HCE0 2579 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 PPP1R17O96001 155 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 LINC00315P59091 139 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
BRF1-201ENST00000327359 CELSR2Q9HCU4 2923 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 POM121L12Q8N7R1 296 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 KIF25-AS1Q9Y6Z4 181 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 B4DSR2 109 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 C9JAW5 83 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 F6UB75 175 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 H3BUX3 64 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
BRF1-201ENST00000327359 J3QQQ9 107 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
BRF1-201ENST00000327359 JPT2Q9H910 190 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 LRRK2Q5S007 2527 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■■□□ 18
BRF1-201ENST00000327359 POLQO75417 2590 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 A4D1N5 150 aa11.97□□□□□ -0.49
BRF1-201ENST00000327359 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
BRF1-201ENST00000327359 SOCS3O14543 225 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.49
BRF1-201ENST00000327359 ZNF876PQ49A33 203 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 UNQ9165/PRO28630Q6UXU0 137 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 Q8N1Y9 231 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 LINC01587Q99440 93 aa11.96□□□□□ -0.49
BRF1-201ENST00000327359 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 A0A087WW49 117 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 OVOL1O14753 267 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 DSCR9P59020 149 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 C5orf47Q569G3 176 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 H7C2G1 150 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 NXPH4O95158 308 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
BRF1-201ENST00000327359 TMEM263Q8WUH6 116 aaKnown RBP11.95□□□□□ -0.5
BRF1-201ENST00000327359 SPXQ9BT56 116 aa11.95□□□□□ -0.5
BRF1-201ENST00000327359 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
BRF1-201ENST00000327359 ANKRD17O75179 2603 aaKnown RBP11.94□□□□□ -0.5
BRF1-201ENST00000327359 FBN2P35556 2912 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 A0A087WWL8 130 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 ELANEP08246 267 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
BRF1-201ENST00000327359 APRG1Q8IVJ8 170 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 CENPEQ02224 2701 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 IGKV3-7A0A075B6H7 116 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 TRAV2A0A0B4J234 112 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 SDHAF1A6NFY7 115 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 VCYO14598 125 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 BLCAPP62952 87 aa11.93□□□□□ -0.5
BRF1-201ENST00000327359 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
BRF1-201ENST00000327359 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
BRF1-201ENST00000327359 LINC01356Q8N9X3 169 aa11.92□□□□□ -0.5
BRF1-201ENST00000327359 A6NDX4 124 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 MUSTN1Q8IVN3 82 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 UBR5O95071 2799 aaPredicted RBP11.91□□□□□ -0.5
BRF1-201ENST00000327359 IGHV3-64A0A075B6Q5 118 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 F5H697 171 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 P0DMU3 169 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
BRF1-201ENST00000327359 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
BRF1-201ENST00000327359 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
BRF1-201ENST00000327359 USP9YO00507 2555 aaPredicted RBP11.9□□□□□ -0.5
BRF1-201ENST00000327359 TMEM223A0PJW6 202 aa11.9□□□□□ -0.5
BRF1-201ENST00000327359 LEPROTO15243 131 aa11.9□□□□□ -0.5
BRF1-201ENST00000327359 ZNF256Q9Y2P7 627 aaPredicted RBP11.9□□□□□ -0.5
BRF1-201ENST00000327359 A0A096LNT2 108 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 TRBV27A0A0K0K1C4 114 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 Q1RN00 199 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
BRF1-201ENST00000327359 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
BRF1-201ENST00000327359 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms