RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 SORL1Q92673 2214 aa8.65□□□□□ -1.02
CDCA8-201ENST00000327331 FCER1GP30273 86 aa8.65□□□□□ -1.02
CDCA8-201ENST00000327331 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
CDCA8-201ENST00000327331 TMEM61Q8N0U2 210 aa8.65□□□□□ -1.02
CDCA8-201ENST00000327331 PRR25Q96S07 402 aa8.65□□□□□ -1.02
CDCA8-201ENST00000327331 OVOL1O14753 267 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 IGKV3-20P01619 116 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 TWIST1Q15672 202 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 NFE4Q86UQ8 179 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 SPATA3Q8NHX4 192 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 ANAPC13Q9BS18 74 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.03
CDCA8-201ENST00000327331 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CDCA8-201ENST00000327331 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
CDCA8-201ENST00000327331 ATP5LO75964 103 aa8.64□□□□□ -1.03
CDCA8-201ENST00000327331 GAGE5Q13069 117 aa8.64□□□□□ -1.03
CDCA8-201ENST00000327331 GAGE6Q13070 117 aa8.64□□□□□ -1.03
CDCA8-201ENST00000327331 TMEM78Q5T7P6 136 aa8.64□□□□□ -1.03
CDCA8-201ENST00000327331 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 K7EQG2 157 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 TRRAPQ9Y4A5 3859 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 DEFB114Q30KQ6 69 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 PRR9Q5T870 116 aa8.63□□□□□ -1.03
CDCA8-201ENST00000327331 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
CDCA8-201ENST00000327331 SH2D1AO60880 128 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 ID1P41134 155 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 OR10J6PQ8NGY7 276 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 PF4P02776 101 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 KRTAP24-1Q3LI83 254 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
CDCA8-201ENST00000327331 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
CDCA8-201ENST00000327331 NXT2Q9NPJ8 142 aaKnown RBP8.62□□□□□ -1.03
CDCA8-201ENST00000327331 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
CDCA8-201ENST00000327331 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
CDCA8-201ENST00000327331 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
CDCA8-201ENST00000327331 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
CDCA8-201ENST00000327331 B5MCH6 92 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 DEFB131AP59861 70 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
CDCA8-201ENST00000327331 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 TNFRSF6BO95407 300 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
CDCA8-201ENST00000327331 PSMB2P49721 201 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 PTH2Q96A98 100 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 VCX2Q9H322 139 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 ORM1P02763 201 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 C11orf21Q9P2W6 132 aa8.59□□□□□ -1.03
CDCA8-201ENST00000327331 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
CDCA8-201ENST00000327331 STAB1Q9NY15 2570 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 TRAV12-2A0A075B6T6 113 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 LOC107984156A0A0G2JMH3 177 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 ARL17AQ8IVW1 177 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 MSRB1Q9NZV6 116 aa8.58□□□□□ -1.04
CDCA8-201ENST00000327331 A0A087WX48 190 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 A0A0J9YX75 114 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 MYMXA0A1B0GTQ4 84 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 LINC01549A6NIU2 74 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 Q8N8P6 123 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 CITED1Q99966 193 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 SPRY2O43597 315 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 PLNP26678 52 aa8.57□□□□□ -1.04
CDCA8-201ENST00000327331 ZNF256Q9Y2P7 627 aaPredicted RBP8.57□□□□□ -1.04
CDCA8-201ENST00000327331 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
CDCA8-201ENST00000327331 GATA1P15976 413 aaPredicted RBP8.56□□□□□ -1.04
CDCA8-201ENST00000327331 HERV-K104P63124 156 aa8.56□□□□□ -1.04
CDCA8-201ENST00000327331 SPINK13Q1W4C9 94 aa8.56□□□□□ -1.04
CDCA8-201ENST00000327331 SFTA2Q6UW10 78 aa8.56□□□□□ -1.04
CDCA8-201ENST00000327331 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
CDCA8-201ENST00000327331 ZNF575Q86XF7 245 aa8.56□□□□□ -1.04
CDCA8-201ENST00000327331 FABP5P3A8MUU1 101 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 ODF3L2Q3SX64 289 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 IGKV3D-20A0A0C4DH25 116 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 CD7P09564 240 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 COX8CQ7Z4L0 72 aa8.55□□□□□ -1.04
CDCA8-201ENST00000327331 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
CDCA8-201ENST00000327331 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
CDCA8-201ENST00000327331 UBE2D3P61077 147 aa8.54□□□□□ -1.04
CDCA8-201ENST00000327331 UBE2D2P62837 147 aa8.54□□□□□ -1.04
CDCA8-201ENST00000327331 LYRM7Q5U5X0 104 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms