RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 A0A087WW49 117 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 SDHAF1A6NFY7 115 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 H7BZZ5 65 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 LEPROTO15243 131 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 C1orf158Q8N1D5 194 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 ITLN2Q8WWU7 325 aaPredicted RBP4.94□□□□□ -1.62
ZNF540-201ENST00000316433 DPM3Q9P2X0 92 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
ZNF540-201ENST00000316433 A0A0J9YX75 114 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 GHRHP01286 108 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
ZNF540-201ENST00000316433 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 PCNX2A6NKB5 2137 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 IGKV2-40A0A087WW87 121 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-201ENST00000316433 IGKV2D-40P01614 121 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-201ENST00000316433 C4orf48Q5BLP8 95 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 C10orf55Q5SWW7 151 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 LYPD5Q6UWN5 251 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 PRSS33Q8NF86 280 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 SMAD5-AS1Q9Y6J3 95 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 TRAV12-3A0A0B4J271 114 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 E7EQL1 145 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 TSHBP01222 138 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 BSPH1Q075Z2 132 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 Q6ZSV7 163 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 Q8TAT8 98 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 UBE2D4Q9Y2X8 147 aa4.93□□□□□ -1.62
ZNF540-201ENST00000316433 TRBV6-5A0A0K0K1A5 114 aa4.92□□□□□ -1.62
ZNF540-201ENST00000316433 LYPD2Q6UXB3 125 aa4.92□□□□□ -1.62
ZNF540-201ENST00000316433 IGHV3-21A0A0B4J1V1 117 aa4.92□□□□□ -1.62
ZNF540-201ENST00000316433 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
ZNF540-201ENST00000316433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.92□□□□□ -1.62
ZNF540-201ENST00000316433 TIMM17BO60830 172 aa4.92□□□□□ -1.62
ZNF540-201ENST00000316433 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 CTSGP08311 255 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 MED13Q9UHV7 2174 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 SOCS3O14543 225 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 DNAL4O96015 105 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 CCKP06307 115 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 ATP1A1-AS1Q5TC04 95 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 Q6ZRU5 148 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 TMEM61Q8N0U2 210 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 LITAFQ99732 161 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 SDK1Q7Z5N4 2213 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 IGIPA6NJ69 53 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 SNRPD3P62318 126 aaKnown RBP4.91□□□□□ -1.62
ZNF540-201ENST00000316433 KHDC1LQ5JSQ8 128 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 ADAMTSL4-AS1Q5T5F5 129 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 VSIG2Q96IQ7 327 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 C22orf24Q9Y442 160 aa4.91□□□□□ -1.62
ZNF540-201ENST00000316433 NAV3Q8IVL0 2385 aa4.9□□□□□ -1.62
ZNF540-201ENST00000316433 CLPSL1A2RUU4 121 aa4.9□□□□□ -1.62
ZNF540-201ENST00000316433 COX7A2LO14548 114 aa4.9□□□□□ -1.62
ZNF540-201ENST00000316433 RBM3P98179 157 aaKnown RBP4.9□□□□□ -1.62
ZNF540-201ENST00000316433 ZNF876PQ49A33 203 aa4.9□□□□□ -1.62
ZNF540-201ENST00000316433 NACAE9PAV3 2078 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 A8MTW9 85 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 RNF223E7ERA6 249 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 TMEM141Q96I45 108 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 TIMM17AQ99595 171 aa4.9□□□□□ -1.63
ZNF540-201ENST00000316433 IGHV3-64A0A075B6Q5 118 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 CFHR3Q02985 330 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 BEAN1Q3B7T3 259 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 SPANXN1Q5VSR9 72 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 STHQ8IWL8 128 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 Q8NA96 180 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 RPL39LQ96EH5 51 aaKnown RBP4.89□□□□□ -1.63
ZNF540-201ENST00000316433 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 ZGRF1Q86YA3 2104 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 CUL9Q8IWT3 2517 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 IGHV1-69P01742 117 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 LINC00467Q9BRT7 94 aa4.89□□□□□ -1.63
ZNF540-201ENST00000316433 IGKV3D-20A0A0C4DH25 116 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 PAX4O43316 350 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 SAA4P35542 130 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 MIAQ16674 131 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 ZNRD1Q9P1U0 126 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 CFAP54Q96N23 3096 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 TRAV23DV6A0A075B6W5 121 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 IGF1P05019 195 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
ZNF540-201ENST00000316433 HILS1P60008 231 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 KLKP1Q107X0 134 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 PRRC2AP48634 2157 aaKnown RBP4.88□□□□□ -1.63
ZNF540-201ENST00000316433 IGHV7-81A0A0B4J1V7 117 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 PLAC8L1A1L4L8 177 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 K7EMT4 169 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 DEFB109BQ30KR1 87 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 DGAT2L7PQ6IED9 249 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 Q8N9W7 124 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 MOB4Q9Y3A3 225 aa4.88□□□□□ -1.63
ZNF540-201ENST00000316433 ATP5EP56381 51 aaPredicted RBP4.87□□□□□ -1.63
ZNF540-201ENST00000316433 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
ZNF540-201ENST00000316433 KIF25-AS1Q9Y6Z4 181 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms