RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 RPL32P62910 135 aaKnown RBP18.69■□□□□ 0.58
HOXB3-201ENST00000311626 A0A096LNT2 108 aa18.69■□□□□ 0.58
HOXB3-201ENST00000311626 A0A1B0GWB2 263 aa18.69■□□□□ 0.58
HOXB3-201ENST00000311626 GATA3P23771 443 aa18.69■□□□□ 0.58
HOXB3-201ENST00000311626 TCTEX1D4Q5JR98 221 aa18.68■□□□□ 0.58
HOXB3-201ENST00000311626 TLN2Q9Y4G6 2542 aa18.68■□□□□ 0.58
HOXB3-201ENST00000311626 MYO9AB2RTY4 2548 aa18.68■□□□□ 0.58
HOXB3-201ENST00000311626 ZNF702PQ9H963 129 aa18.68■□□□□ 0.58
HOXB3-201ENST00000311626 LINC01619G3V211 115 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 TMEM141Q96I45 108 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 Q9UF83 564 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 A0A0J9YY99 117 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 HERVK_113P61574 105 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 SAMD13Q5VXD3 122 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 TIMM17AQ99595 171 aa18.67■□□□□ 0.58
HOXB3-201ENST00000311626 SPANXB1Q9NS25 103 aaPredicted RBP18.67■□□□□ 0.58
HOXB3-201ENST00000311626 VPREB3Q9UKI3 123 aa18.66■□□□□ 0.58
HOXB3-201ENST00000311626 TRBV6-5A0A0K0K1A5 114 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 DEFB131AP59861 70 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 LOC107984156A0A0G2JMH3 177 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 GAGE13Q4V321 117 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 ARL17AQ8IVW1 177 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 ODF3Q96PU9 254 aa18.65■□□□□ 0.58
HOXB3-201ENST00000311626 DSCR9P59020 149 aa18.64■□□□□ 0.57
HOXB3-201ENST00000311626 KRTAP10-9P60411 292 aa18.64■□□□□ 0.57
HOXB3-201ENST00000311626 INSL3P51460 131 aa18.64■□□□□ 0.57
HOXB3-201ENST00000311626 F8W1H4 67 aa18.63■□□□□ 0.57
HOXB3-201ENST00000311626 TRPT1Q86TN4 253 aaKnown RBP18.63■□□□□ 0.57
HOXB3-201ENST00000311626 CEMP1Q6PRD7 247 aaPredicted RBP18.63■□□□□ 0.57
HOXB3-201ENST00000311626 TSPAN13O95857 204 aa18.62■□□□□ 0.57
HOXB3-201ENST00000311626 RNASE13Q5GAN3 156 aaKnown RBP18.62■□□□□ 0.57
HOXB3-201ENST00000311626 NAV2Q8IVL1 2488 aa18.62■□□□□ 0.57
HOXB3-201ENST00000311626 PRO0461Q9UI25 63 aa18.62■□□□□ 0.57
HOXB3-201ENST00000311626 PAPPA-AS1Q5QFB9 102 aa18.61■□□□□ 0.57
HOXB3-201ENST00000311626 A0A0J9YXV3 536 aa18.61■□□□□ 0.57
HOXB3-201ENST00000311626 J3QQQ9 107 aa18.61■□□□□ 0.57
HOXB3-201ENST00000311626 UBE2D1P51668 147 aa18.61■□□□□ 0.57
HOXB3-201ENST00000311626 KHDC1LQ5JSQ8 128 aa18.61■□□□□ 0.57
HOXB3-201ENST00000311626 PSMB2P49721 201 aa18.6■□□□□ 0.57
HOXB3-201ENST00000311626 Q6YL49 198 aa18.6■□□□□ 0.57
HOXB3-201ENST00000311626 RBMY1BA6NDE4 496 aaKnown RBP18.6■□□□□ 0.57
HOXB3-201ENST00000311626 RBMY1EA6NEQ0 496 aaKnown RBP18.6■□□□□ 0.57
HOXB3-201ENST00000311626 RBMY1DP0C7P1 496 aaKnown RBP18.6■□□□□ 0.57
HOXB3-201ENST00000311626 ZNF469Q96JG9 3925 aaPredicted RBP18.6■□□□□ 0.57
HOXB3-201ENST00000311626 C20orf203Q8NBC4 194 aa18.59■□□□□ 0.57
HOXB3-201ENST00000311626 UBE2E2Q96LR5 201 aa18.59■□□□□ 0.57
HOXB3-201ENST00000311626 AMELXQ99217 191 aa18.59■□□□□ 0.57
HOXB3-201ENST00000311626 TSSC4Q9Y5U2 329 aaPredicted RBP18.59■□□□□ 0.57
HOXB3-201ENST00000311626 ELANEP08246 267 aa18.59■□□□□ 0.57
HOXB3-201ENST00000311626 SPAG8Q99932 426 aaPredicted RBP18.59■□□□□ 0.57
HOXB3-201ENST00000311626 SONP18583 2426 aaKnown RBP18.58■□□□□ 0.57
HOXB3-201ENST00000311626 TMEM89A2RUT3 159 aa18.58■□□□□ 0.57
HOXB3-201ENST00000311626 I3L3M4 83 aa18.58■□□□□ 0.57
HOXB3-201ENST00000311626 LGALS3P17931 250 aaKnown RBP18.58■□□□□ 0.57
HOXB3-201ENST00000311626 NSUN5P1Q3KNT7 163 aa18.58■□□□□ 0.56
HOXB3-201ENST00000311626 IGHV4-31P0DP07 118 aa18.57■□□□□ 0.56
HOXB3-201ENST00000311626 GTSF1LQ9H1H1 148 aa18.57■□□□□ 0.56
HOXB3-201ENST00000311626 IGHV3-30P01768 117 aa18.57■□□□□ 0.56
HOXB3-201ENST00000311626 IGHV3-30-5P0DP03 117 aa18.57■□□□□ 0.56
HOXB3-201ENST00000311626 Q6ZSN1 163 aa18.57■□□□□ 0.56
HOXB3-201ENST00000311626 ADARB2-AS1A8MUL3 147 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 NDUFA11Q86Y39 141 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 IGLV4-3A0A075B6K6 122 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 CFC1BP0CG36 223 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 CFC1P0CG37 223 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 ZNF418Q8TF45 676 aaPredicted RBP18.56■□□□□ 0.56
HOXB3-201ENST00000311626 WNK1Q9H4A3 2382 aa18.56■□□□□ 0.56
HOXB3-201ENST00000311626 TRGV11A0A075B6L2 103 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 RHOHQ15669 191 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 NACAE9PAV3 2078 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 J3QLI3 93 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 ZNF22P17026 224 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-201ENST00000311626 TMEM61Q8N0U2 210 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 SLC25A29Q8N8R3 303 aa18.55■□□□□ 0.56
HOXB3-201ENST00000311626 VCX2Q9H322 139 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 EPG5Q9HCE0 2579 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 CHD6Q8TD26 2715 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 TMEM223A0PJW6 202 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 SMCPP49901 116 aaPredicted RBP18.54■□□□□ 0.56
HOXB3-201ENST00000311626 USP24Q9UPU5 2620 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 CR1P17927 2039 aa18.54■□□□□ 0.56
HOXB3-201ENST00000311626 PTH2Q96A98 100 aa18.53■□□□□ 0.56
HOXB3-201ENST00000311626 H3BMM0 161 aa18.53■□□□□ 0.56
HOXB3-201ENST00000311626 SPXQ9BT56 116 aa18.53■□□□□ 0.56
HOXB3-201ENST00000311626 NFE4Q86UQ8 179 aa18.53■□□□□ 0.56
HOXB3-201ENST00000311626 PRRC2AP48634 2157 aaKnown RBP18.52■□□□□ 0.56
HOXB3-201ENST00000311626 TRAV2A0A0B4J234 112 aa18.52■□□□□ 0.55
HOXB3-201ENST00000311626 RHODO00212 210 aa18.52■□□□□ 0.55
HOXB3-201ENST00000311626 CD28P10747 220 aa18.52■□□□□ 0.55
HOXB3-201ENST00000311626 BBC3Q96PG8 261 aaPredicted RBP18.52■□□□□ 0.55
HOXB3-201ENST00000311626 IGHV3-38A0A0C4DH36 116 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 H7C2G1 150 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 DLX4Q92988 240 aaPredicted RBP18.51■□□□□ 0.55
HOXB3-201ENST00000311626 NOTCH3Q9UM47 2321 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 NF1P21359 2839 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 FAM104AQ969W3 186 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 RAX2Q96IS3 184 aa18.51■□□□□ 0.55
HOXB3-201ENST00000311626 FSHBP01225 129 aa18.5■□□□□ 0.55
HOXB3-201ENST00000311626 C11orf44Q8N8P7 122 aa18.5■□□□□ 0.55
HOXB3-201ENST00000311626 EIF4EBP3O60516 100 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms