RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 NEXN-AS1Q8NBZ9 246 aa10.08□□□□□ -0.8
DDX54-201ENST00000306014 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
DDX54-201ENST00000306014 USP9XQ93008 2570 aaPredicted RBP10.08□□□□□ -0.8
DDX54-201ENST00000306014 LMO4P61968 165 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 MRPS12O15235 138 aaKnown RBP10.07□□□□□ -0.8
DDX54-201ENST00000306014 EBI3Q14213 229 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
DDX54-201ENST00000306014 LRRK2Q5S007 2527 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 IGHG2P01859 326 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 NDUFA11Q86Y39 141 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 HIVEP2P31629 2446 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 Q6ZQT7 251 aa10.07□□□□□ -0.8
DDX54-201ENST00000306014 ELANEP08246 267 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 IFITM1P13164 125 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 PFN2P35080 140 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 NRACQ8N912 160 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 Q9H8V8 135 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 A0A096LNJ9 63 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 DAND5Q8N907 189 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 CFAP54Q96N23 3096 aa10.06□□□□□ -0.8
DDX54-201ENST00000306014 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
DDX54-201ENST00000306014 APRG1Q8IVJ8 170 aa10.05□□□□□ -0.8
DDX54-201ENST00000306014 U3KQE9 123 aa10.05□□□□□ -0.8
DDX54-201ENST00000306014 PKD1L2Q7Z442 2459 aa10.05□□□□□ -0.8
DDX54-201ENST00000306014 TCL1BO95988 128 aa10.05□□□□□ -0.8
DDX54-201ENST00000306014 B5MCH6 92 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 GAGE7O76087 117 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 SLURP1P55000 103 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 PRR9Q5T870 116 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 Q96MF0 132 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
DDX54-201ENST00000306014 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
DDX54-201ENST00000306014 HERVK_113P63121 156 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 K7EMT4 169 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 HIST1H4AP62805 103 aaKnown RBP10.03□□□□□ -0.8
DDX54-201ENST00000306014 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 Q8N6K4 173 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 C10orf105Q8TEF2 133 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 NRGNQ92686 78 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 GAGE6Q13070 117 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
DDX54-201ENST00000306014 ZNF462Q96JM2 2506 aa10.02□□□□□ -0.8
DDX54-201ENST00000306014 ABCA2Q9BZC7 2435 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 A0A087WW49 117 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 GPHB5Q86YW7 130 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 VPREB3Q9UKI3 123 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 A0A0J9YX75 114 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 CRYBA4P53673 196 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 ICOSQ9Y6W8 199 aa10.02□□□□□ -0.81
DDX54-201ENST00000306014 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 UFSP1Q6NVU6 142 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 RAI1Q7Z5J4 1906 aaPredicted RBP10.01□□□□□ -0.81
DDX54-201ENST00000306014 A0A0J9YY99 117 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 EDA2RQ9HAV5 297 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 TRIOO75962 3097 aa10.01□□□□□ -0.81
DDX54-201ENST00000306014 P0DMU3 169 aa10□□□□□ -0.81
DDX54-201ENST00000306014 FAM231AP0DMU4 169 aa10□□□□□ -0.81
DDX54-201ENST00000306014 FAM231CP0DMU5 169 aa10□□□□□ -0.81
DDX54-201ENST00000306014 F8W735 103 aaPredicted RBP10□□□□□ -0.81
DDX54-201ENST00000306014 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
DDX54-201ENST00000306014 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
DDX54-201ENST00000306014 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
DDX54-201ENST00000306014 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
DDX54-201ENST00000306014 CLPSL1A2RUU4 121 aa10□□□□□ -0.81
DDX54-201ENST00000306014 ATP6V0E2Q8NHE4 81 aa10□□□□□ -0.81
DDX54-201ENST00000306014 AGRNO00468 2067 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 A6NDX4 124 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 CDSNQ15517 529 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 C11orf71Q6IPW1 123 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 MT-ATP8P03928 68 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 ZNF843Q8N446 348 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 CLEC2BQ92478 149 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 PTPRBP23467 1997 aa9.99□□□□□ -0.81
DDX54-201ENST00000306014 J3QLI3 93 aa9.98□□□□□ -0.81
DDX54-201ENST00000306014 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
DDX54-201ENST00000306014 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
DDX54-201ENST00000306014 OVOL2Q9BRP0 275 aa9.98□□□□□ -0.81
DDX54-201ENST00000306014 NXPH4O95158 308 aa9.98□□□□□ -0.81
DDX54-201ENST00000306014 RNASE3P12724 160 aaKnown RBP9.98□□□□□ -0.81
DDX54-201ENST00000306014 INSL3P51460 131 aa9.98□□□□□ -0.81
DDX54-201ENST00000306014 REV3LO60673 3130 aa9.97□□□□□ -0.81
DDX54-201ENST00000306014 Q6ZUT4 128 aa9.97□□□□□ -0.81
DDX54-201ENST00000306014 RS1O15537 224 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms