RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 IGKV3D-7A0A0C4DH55 119 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 LINC01548A6NM66 108 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 TRBV12-3P01733 135 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 CCDC140Q96MF4 163 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 LAMA2P24043 3122 aaKnown RBP11.61□□□□□ -0.55
DDB1-201ENST00000301764 TRAV13-2A0A0B4J235 113 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 SPANXDQ9BXN6 97 aa11.61□□□□□ -0.55
DDB1-201ENST00000301764 RPL35AP18077 110 aaKnown RBP11.6□□□□□ -0.55
DDB1-201ENST00000301764 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
DDB1-201ENST00000301764 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 HAMPP81172 84 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
DDB1-201ENST00000301764 Q6ZS46 218 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 UBL5Q9BZL1 73 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 A0A0B4J2C4 111 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 MSMBP08118 114 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 A0A1B0GX51 115 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 C5orf56Q8N8D9 126 aa11.58□□□□□ -0.56
DDB1-201ENST00000301764 FSTL3O95633 263 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 DEFB130BP0DP73 79 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 DEFB130AP0DP74 79 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 MAPK1IP1LQ8NDC0 245 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 Q6ZQT7 251 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 CEP192Q8TEP8 1941 aa11.57□□□□□ -0.56
DDB1-201ENST00000301764 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
DDB1-201ENST00000301764 TRIAP1O43715 76 aa11.56□□□□□ -0.56
DDB1-201ENST00000301764 CHD7Q9P2D1 2997 aa11.56□□□□□ -0.56
DDB1-201ENST00000301764 PF4P02776 101 aa11.56□□□□□ -0.56
DDB1-201ENST00000301764 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 U3KQE9 123 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 MRPS12O15235 138 aaKnown RBP11.55□□□□□ -0.56
DDB1-201ENST00000301764 IGHV3-30P01768 117 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 IGHV3-30-5P0DP03 117 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 USP9XQ93008 2570 aaPredicted RBP11.55□□□□□ -0.56
DDB1-201ENST00000301764 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
DDB1-201ENST00000301764 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 C20orf173Q96LM9 149 aa11.55□□□□□ -0.56
DDB1-201ENST00000301764 USP9YO00507 2555 aaPredicted RBP11.55□□□□□ -0.56
DDB1-201ENST00000301764 K7ENP7 123 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 P0DMU3 169 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 GHRHP01286 108 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 CNFNQ9BYD5 112 aa11.54□□□□□ -0.56
DDB1-201ENST00000301764 ATOX1O00244 68 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 ABCA2Q9BZC7 2435 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 H3BUA1 57 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 GNLYP22749 145 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 SS18Q15532 418 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 MIAQ16674 131 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 PRR9Q5T870 116 aa11.53□□□□□ -0.56
DDB1-201ENST00000301764 Q9HAA7 133 aa11.52□□□□□ -0.56
DDB1-201ENST00000301764 LY6LH3BQJ8 138 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 J3KT08 172 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 ZMAT4Q9H898 229 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 C5orf38Q86SI9 138 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 LINC00643Q86TS7 51 aa11.52□□□□□ -0.57
DDB1-201ENST00000301764 COL5A1P20908 1838 aaPredicted RBP11.51□□□□□ -0.57
DDB1-201ENST00000301764 CRLF1O75462 422 aa11.51□□□□□ -0.57
DDB1-201ENST00000301764 DEFB136Q30KP8 78 aa11.51□□□□□ -0.57
DDB1-201ENST00000301764 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
DDB1-201ENST00000301764 ODF3BA8MYP8 253 aa11.51□□□□□ -0.57
DDB1-201ENST00000301764 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 LINC01619G3V211 115 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 NCOR2Q9Y618 2525 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 RBMY1FQ15415 496 aaKnown RBP11.5□□□□□ -0.57
DDB1-201ENST00000301764 APRG1Q8IVJ8 170 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 HTTP42858 3142 aa11.5□□□□□ -0.57
DDB1-201ENST00000301764 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
DDB1-201ENST00000301764 CLPSL2Q6UWE3 100 aa11.49□□□□□ -0.57
DDB1-201ENST00000301764 SIRPDQ9H106 197 aa11.49□□□□□ -0.57
DDB1-201ENST00000301764 UBE2D1P51668 147 aa11.49□□□□□ -0.57
DDB1-201ENST00000301764 A8MZ25 164 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 LECT2O14960 151 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
DDB1-201ENST00000301764 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
DDB1-201ENST00000301764 CRIP2P52943 208 aaPredicted RBP11.47□□□□□ -0.57
DDB1-201ENST00000301764 DAZ2Q13117 558 aaKnown RBP11.47□□□□□ -0.57
DDB1-201ENST00000301764 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
DDB1-201ENST00000301764 DAZ3Q9NR90 486 aaKnown RBP11.47□□□□□ -0.57
DDB1-201ENST00000301764 A0A0J9YX75 114 aa11.47□□□□□ -0.57
DDB1-201ENST00000301764 RNASE3P12724 160 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms