RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 F5H768 121 aa13.05□□□□□ -0.32
TRIM9-201ENST00000298355 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
TRIM9-201ENST00000298355 PCNX2A6NKB5 2137 aa13.05□□□□□ -0.32
TRIM9-201ENST00000298355 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 RNF152Q8N8N0 203 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 B4DSR2 109 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 NRACQ8N912 160 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 PRB1P04280 392 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 MSMPQ1L6U9 139 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 SPRY4Q9C004 299 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
TRIM9-201ENST00000298355 Q6ZQT7 251 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 C10orf105Q8TEF2 133 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 BPESC1Q9GZL8 116 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 UBE2D1P51668 147 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
TRIM9-201ENST00000298355 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 TTC28Q96AY4 2481 aa13.03□□□□□ -0.32
TRIM9-201ENST00000298355 UBE2D3P61077 147 aa13.02□□□□□ -0.32
TRIM9-201ENST00000298355 UBE2D2P62837 147 aa13.02□□□□□ -0.32
TRIM9-201ENST00000298355 CFHR3Q02985 330 aa13.02□□□□□ -0.32
TRIM9-201ENST00000298355 Q6ZS46 218 aa13.02□□□□□ -0.32
TRIM9-201ENST00000298355 COX7B2Q8TF08 81 aa13.02□□□□□ -0.33
TRIM9-201ENST00000298355 V9GYY9 64 aa13.02□□□□□ -0.33
TRIM9-201ENST00000298355 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
TRIM9-201ENST00000298355 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
TRIM9-201ENST00000298355 A0A096LNJ9 63 aa13.02□□□□□ -0.33
TRIM9-201ENST00000298355 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
TRIM9-201ENST00000298355 HCFC1P51610 2035 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 FAM240AA0A1B0GVK7 77 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 LST1O00453 97 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 GATA3P23771 443 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 H7C423 109 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 DEFB1P60022 68 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 RMI2Q96E14 147 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 H3BUA1 57 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
TRIM9-201ENST00000298355 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
TRIM9-201ENST00000298355 UPK3BQ9BT76 320 aa13□□□□□ -0.33
TRIM9-201ENST00000298355 U3KQE9 123 aa13□□□□□ -0.33
TRIM9-201ENST00000298355 A0A0U1RQV1 116 aa12.99□□□□□ -0.33
TRIM9-201ENST00000298355 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
TRIM9-201ENST00000298355 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
TRIM9-201ENST00000298355 CXCL5P42830 114 aa12.99□□□□□ -0.33
TRIM9-201ENST00000298355 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
TRIM9-201ENST00000298355 DEFB130BP0DP73 79 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 DEFB130AP0DP74 79 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 C5orf38Q86SI9 138 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 PCNX1Q96RV3 2341 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 Q8N9W7 124 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 USP17L23D6RBM5 183 aa12.98□□□□□ -0.33
TRIM9-201ENST00000298355 TMEM256-PLSCR3K7ERE1 68 aa12.97□□□□□ -0.33
TRIM9-201ENST00000298355 HRCT1Q6UXD1 115 aa12.97□□□□□ -0.33
TRIM9-201ENST00000298355 CRIP2P52943 208 aaPredicted RBP12.97□□□□□ -0.33
TRIM9-201ENST00000298355 ATP5EP2Q5VTU8 51 aa12.97□□□□□ -0.33
TRIM9-201ENST00000298355 FAM19A5Q7Z5A7 132 aaPredicted RBP12.97□□□□□ -0.33
TRIM9-201ENST00000298355 C11orf44Q8N8P7 122 aa12.97□□□□□ -0.33
TRIM9-201ENST00000298355 NDUFC2-KCTD14E9PQ53 114 aa12.97□□□□□ -0.33
TRIM9-201ENST00000298355 ZNF561-AS1K7EIQ3 104 aa12.96□□□□□ -0.33
TRIM9-201ENST00000298355 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.33
TRIM9-201ENST00000298355 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
TRIM9-201ENST00000298355 DAD1P61803 113 aa12.96□□□□□ -0.34
TRIM9-201ENST00000298355 DKK4Q9UBT3 224 aa12.96□□□□□ -0.34
TRIM9-201ENST00000298355 IGLV4-3A0A075B6K6 122 aa12.96□□□□□ -0.34
TRIM9-201ENST00000298355 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
TRIM9-201ENST00000298355 XCL1P47992 114 aa12.95□□□□□ -0.34
TRIM9-201ENST00000298355 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
TRIM9-201ENST00000298355 NACAE9PAV3 2078 aa12.94□□□□□ -0.34
TRIM9-201ENST00000298355 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
TRIM9-201ENST00000298355 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
TRIM9-201ENST00000298355 MPLKIPQ8TAP9 179 aa12.94□□□□□ -0.34
TRIM9-201ENST00000298355 TRBV12-3P01733 135 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 IGFL3Q6UXB1 125 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 LY6DQ14210 128 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
TRIM9-201ENST00000298355 AJUBAQ96IF1 538 aa12.92□□□□□ -0.34
TRIM9-201ENST00000298355 TIRAPP58753 221 aa12.92□□□□□ -0.34
TRIM9-201ENST00000298355 ABCA4P78363 2273 aa12.92□□□□□ -0.34
TRIM9-201ENST00000298355 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
TRIM9-201ENST00000298355 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
TRIM9-201ENST00000298355 NRGNQ92686 78 aa12.91□□□□□ -0.34
TRIM9-201ENST00000298355 H3BQ85 93 aa12.91□□□□□ -0.34
TRIM9-201ENST00000298355 IGF1P05019 195 aa12.91□□□□□ -0.34
TRIM9-201ENST00000298355 CLPSL2Q6UWE3 100 aa12.9□□□□□ -0.34
TRIM9-201ENST00000298355 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
TRIM9-201ENST00000298355 LOC107984640A0A0U1RRK4 108 aa12.89□□□□□ -0.35
TRIM9-201ENST00000298355 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
TRIM9-201ENST00000298355 NDUFA1O15239 70 aa12.89□□□□□ -0.35
TRIM9-201ENST00000298355 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
TRIM9-201ENST00000298355 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms