RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV4-4A0A075B6R2 117 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
UBAP1-201ENST00000297661 MAST4O15021 2626 aa11.72□□□□□ -0.53
UBAP1-201ENST00000297661 EMP1P54849 157 aa11.72□□□□□ -0.53
UBAP1-201ENST00000297661 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
UBAP1-201ENST00000297661 RPL39LQ96EH5 51 aaKnown RBP11.72□□□□□ -0.53
UBAP1-201ENST00000297661 U3KQE9 123 aa11.72□□□□□ -0.53
UBAP1-201ENST00000297661 EDN2P20800 178 aa11.72□□□□□ -0.53
UBAP1-201ENST00000297661 C11orf86A6NJI1 115 aa11.71□□□□□ -0.53
UBAP1-201ENST00000297661 BLCAPP62952 87 aa11.71□□□□□ -0.53
UBAP1-201ENST00000297661 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
UBAP1-201ENST00000297661 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
UBAP1-201ENST00000297661 OTOGQ6ZRI0 2925 aa11.71□□□□□ -0.54
UBAP1-201ENST00000297661 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.54
UBAP1-201ENST00000297661 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
UBAP1-201ENST00000297661 IGHV1-69DA0A0B4J2H0 117 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 IGHV1-69P01742 117 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 CRYGDP07320 174 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
UBAP1-201ENST00000297661 PF4V1P10720 104 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 HERVK_113P61574 105 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
UBAP1-201ENST00000297661 H3BUX3 64 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 ATP5J2P56134 94 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 FAM159AQ6UWV7 190 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 Q8N1Y9 231 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
UBAP1-201ENST00000297661 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
UBAP1-201ENST00000297661 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
UBAP1-201ENST00000297661 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 M0QXV9 152 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
UBAP1-201ENST00000297661 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
UBAP1-201ENST00000297661 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 GNRH2O43555 120 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 C19orf54Q5BKX5 351 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 Q6Q795 121 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
UBAP1-201ENST00000297661 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
UBAP1-201ENST00000297661 H7C2G1 150 aa11.67□□□□□ -0.54
UBAP1-201ENST00000297661 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
UBAP1-201ENST00000297661 MGPP08493 103 aa11.67□□□□□ -0.54
UBAP1-201ENST00000297661 SORL1Q92673 2214 aa11.67□□□□□ -0.54
UBAP1-201ENST00000297661 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 OR10J6PQ8NGY7 276 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 A4D1N5 150 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
UBAP1-201ENST00000297661 CUBNO60494 3623 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 TSHBP01222 138 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
UBAP1-201ENST00000297661 SONP18583 2426 aaKnown RBP11.65□□□□□ -0.54
UBAP1-201ENST00000297661 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
UBAP1-201ENST00000297661 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
UBAP1-201ENST00000297661 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
UBAP1-201ENST00000297661 TEP1Q99973 2627 aaKnown RBP11.65□□□□□ -0.54
UBAP1-201ENST00000297661 IGHV4-30-2A0A087WSY4 118 aa11.65□□□□□ -0.55
UBAP1-201ENST00000297661 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.55
UBAP1-201ENST00000297661 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.55
UBAP1-201ENST00000297661 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.55
UBAP1-201ENST00000297661 ELANEP08246 267 aa11.64□□□□□ -0.55
UBAP1-201ENST00000297661 DEFB113Q30KQ7 82 aa11.64□□□□□ -0.55
UBAP1-201ENST00000297661 SOCS3O14543 225 aa11.64□□□□□ -0.55
UBAP1-201ENST00000297661 AMELXQ99217 191 aa11.64□□□□□ -0.55
UBAP1-201ENST00000297661 RHPN1-AS1Q9BWJ2 59 aa11.64□□□□□ -0.55
UBAP1-201ENST00000297661 PMVKQ15126 192 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 TMEM263Q8WUH6 116 aaKnown RBP11.63□□□□□ -0.55
UBAP1-201ENST00000297661 TP53TG1Q9Y2A0 90 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 NDUFA4O00483 81 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 BRI3O95415 125 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 PIMREGQ9BSJ6 248 aa11.63□□□□□ -0.55
UBAP1-201ENST00000297661 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 AVPP01185 164 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 P0DMU3 169 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 JPT2Q9H910 190 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 MUC4Q99102 2169 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 J3QQQ9 107 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 ATXN8Q156A1 80 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 Q1RN00 199 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 C10orf99Q6UWK7 81 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 LINC00477Q96M19 166 aa11.62□□□□□ -0.55
UBAP1-201ENST00000297661 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
UBAP1-201ENST00000297661 MTORP42345 2549 aa11.61□□□□□ -0.55
UBAP1-201ENST00000297661 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
UBAP1-201ENST00000297661 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
UBAP1-201ENST00000297661 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
UBAP1-201ENST00000297661 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
UBAP1-201ENST00000297661 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms