RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 Q6ZSN1 163 aa9.82□□□□□ -0.84
CHMP4C-201ENST00000297265 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
CHMP4C-201ENST00000297265 Q9UF83 564 aa9.82□□□□□ -0.84
CHMP4C-201ENST00000297265 VCYO14598 125 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 SPXQ9BT56 116 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 A8MWV9 139 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 ATP5LO75964 103 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 C2orf66Q6UXQ4 117 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 MRPL16Q9NX20 251 aaKnown RBP9.81□□□□□ -0.84
CHMP4C-201ENST00000297265 PRSS1P07477 247 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 P0DMU3 169 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 ANKRD39Q53RE8 183 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 STPG4Q8N801 248 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 TMEM208Q9BTX3 173 aa9.8□□□□□ -0.84
CHMP4C-201ENST00000297265 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
CHMP4C-201ENST00000297265 Q6ZN92 141 aa9.79□□□□□ -0.84
CHMP4C-201ENST00000297265 RS1O15537 224 aa9.79□□□□□ -0.84
CHMP4C-201ENST00000297265 TSHBP01222 138 aa9.79□□□□□ -0.84
CHMP4C-201ENST00000297265 INSL3P51460 131 aa9.78□□□□□ -0.84
CHMP4C-201ENST00000297265 NEXN-AS1Q8NBZ9 246 aa9.78□□□□□ -0.84
CHMP4C-201ENST00000297265 SCGB3A1Q96QR1 104 aa9.78□□□□□ -0.84
CHMP4C-201ENST00000297265 C2orf88Q9BSF0 95 aa9.78□□□□□ -0.84
CHMP4C-201ENST00000297265 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.84
CHMP4C-201ENST00000297265 IGIPA6NJ69 53 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 M0R143 59 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 RIPPLY3P57055 190 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 ERASQ7Z444 233 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 KIR2DL4Q99706 377 aa9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
CHMP4C-201ENST00000297265 A0A087WX48 190 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 RPL39P62891 51 aaKnown RBP9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 MRPS16Q9Y3D3 137 aaKnown RBP9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 TRAV12-1A0A0B4J245 112 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 IGHV3-53P01767 116 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 FGF6P10767 208 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 HNRNPA3P51991 378 aaKnown RBP9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 MRPL52Q86TS9 123 aaKnown RBP9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
CHMP4C-201ENST00000297265 COX8AP10176 69 aa9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 Q6ZTI0 123 aa9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
CHMP4C-201ENST00000297265 H7C1H1 209 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 I3L3M4 83 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 IGKCP01834 107 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 DAZ2Q13117 558 aaKnown RBP9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 TCTAP57738 103 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 ZNF479Q96JC4 524 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 C1QTNF4Q9BXJ3 329 aa9.74□□□□□ -0.85
CHMP4C-201ENST00000297265 IGKV2D-26A0A0A0MRZ7 120 aa9.73□□□□□ -0.85
CHMP4C-201ENST00000297265 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
CHMP4C-201ENST00000297265 RHODO00212 210 aa9.73□□□□□ -0.85
CHMP4C-201ENST00000297265 DPM2O94777 84 aa9.73□□□□□ -0.85
CHMP4C-201ENST00000297265 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
CHMP4C-201ENST00000297265 PRSS29PA6NIE9 313 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 F8VRH5 84 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 RHOHQ15669 191 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 C2orf91Q6ZV80 131 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 NBEAL2Q6ZNJ1 2754 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 G0S2P27469 103 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 BOD1L2Q8IYS8 172 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 C20orf203Q8NBC4 194 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 C16orf74Q96GX8 76 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 OVOL2Q9BRP0 275 aa9.72□□□□□ -0.85
CHMP4C-201ENST00000297265 A0A1B0GV90 55 aa9.71□□□□□ -0.85
CHMP4C-201ENST00000297265 LINC01549A6NIU2 74 aa9.71□□□□□ -0.85
CHMP4C-201ENST00000297265 KRTAP24-1Q3LI83 254 aa9.71□□□□□ -0.85
CHMP4C-201ENST00000297265 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.85
CHMP4C-201ENST00000297265 PCP2Q8IVA1 136 aa9.71□□□□□ -0.85
CHMP4C-201ENST00000297265 WIPF1O43516 503 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 OPRPNQ99935 248 aaPredicted RBP9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 CMYA5Q8N3K9 4069 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 RRN3P1Q2M238 152 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
CHMP4C-201ENST00000297265 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
CHMP4C-201ENST00000297265 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
CHMP4C-201ENST00000297265 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
CHMP4C-201ENST00000297265 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
CHMP4C-201ENST00000297265 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
CHMP4C-201ENST00000297265 DLEU1O43261 78 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms