RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MRAPQ8TCY5 172 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 NXPH4O95158 308 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 SPATA12Q7Z6I5 190 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 TRPT1Q86TN4 253 aaKnown RBP3.65□□□□□ -1.82
UBR1-201ENST00000290650 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 Q8N976 141 aa3.65□□□□□ -1.82
UBR1-201ENST00000290650 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 CRYGCP07315 174 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 A0A087WX48 190 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 I3L3M4 83 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 J3KT08 172 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 ETDBQ3ZM63 59 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 F5H768 121 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 MBD6Q96DN6 1003 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 TAX1BP3O14907 124 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 RS1O15537 224 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 CRYGBP07316 175 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 RBX1P62877 108 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 KLF12Q9Y4X4 402 aa3.65□□□□□ -1.83
UBR1-201ENST00000290650 IGLV10-54A0A075B6I4 117 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 PROK1P58294 105 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 LGALS9BQ3B8N2 356 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 LGALS9CQ6DKI2 356 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 CEND1Q8N111 149 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 FXYD2P54710 66 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 SH2D6Q7Z4S9 175 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 WFDC11Q8NEX6 87 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 SCRT2Q9NQ03 307 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 F8VRH5 84 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 DEFB125Q8N687 156 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 TMEM190Q8WZ59 177 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 MRPL53Q96EL3 112 aaKnown RBP3.64□□□□□ -1.83
UBR1-201ENST00000290650 C9orf118A6NHY6 69 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 LY6G5BQ8NDX9 201 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 PRORYQ9H606 182 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 C6orf226Q5I0X4 101 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 LINC00574Q9H8X3 128 aa3.64□□□□□ -1.83
UBR1-201ENST00000290650 RBAKDNA6NC62 111 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 GATA3P23771 443 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 MRPL55Q7Z7F7 128 aaKnown RBP3.63□□□□□ -1.83
UBR1-201ENST00000290650 ZNF292O60281 2723 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 TRBV25-1A0A075B6N4 114 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 A8MWV9 139 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 AVPP01185 164 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 XCL1P47992 114 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 LGALS1P09382 135 aaKnown RBP3.63□□□□□ -1.83
UBR1-201ENST00000290650 KRTAP10-9P60411 292 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 HERV-K104P63124 156 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 IGLV2-11P01706 119 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 TRACP01848 142 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 PRR9Q5T870 116 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 MORN3Q6PF18 240 aaPredicted RBP3.63□□□□□ -1.83
UBR1-201ENST00000290650 TMEM61Q8N0U2 210 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 A0A1W2PPM0 123 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 J3QKU1 62 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 IFITM1P13164 125 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 SMR3AQ99954 134 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 MLST8Q9BVC4 326 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 FGF6P10767 208 aa3.63□□□□□ -1.83
UBR1-201ENST00000290650 DLX4Q92988 240 aaPredicted RBP3.63□□□□□ -1.83
UBR1-201ENST00000290650 A0A1B0GXF2 115 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 GAGE2AQ6NT46 116 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C5orf38Q86SI9 138 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 BAALCQ8WXS3 180 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C2orf82Q6UX34 121 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 TSSC4Q9Y5U2 329 aaPredicted RBP3.62□□□□□ -1.83
UBR1-201ENST00000290650 J3QQQ9 107 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 IGHG2P01859 326 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 CRPP02741 224 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C12orf74Q32Q52 190 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 B5MCH6 92 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 ZFP2Q6ZN57 461 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C11orf21Q9P2W6 132 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 NDUFA12Q9UI09 145 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 LINC01559Q495D7 138 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 SVEP1Q4LDE5 3571 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 CRYBA4P53673 196 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C9orf47Q6ZRZ4 202 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 C3orf56Q8N813 242 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 TMEM141Q96I45 108 aa3.62□□□□□ -1.83
UBR1-201ENST00000290650 A6NDX4 124 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 FOXI2Q6ZQN5 318 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 ZFAND3Q9H8U3 227 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 GAGE12HA6NDE8 117 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 TMEM258P61165 79 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 PLEKHB2Q96CS7 222 aa3.61□□□□□ -1.83
UBR1-201ENST00000290650 IGKV2D-26A0A0A0MRZ7 120 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms