RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NDUFA4O00483 81 aa10.12□□□□□ -0.79
SCAF4-201ENST00000286835 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
SCAF4-201ENST00000286835 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 CRYBA4P53673 196 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 COX8CQ7Z4L0 72 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 TEN1Q86WV5 123 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
SCAF4-201ENST00000286835 PF4P02776 101 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 IGHV4-59P01825 116 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 ZNF843Q8N446 348 aa10.11□□□□□ -0.79
SCAF4-201ENST00000286835 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 MUSTN1Q8IVN3 82 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 MDFICQ9P1T7 246 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
SCAF4-201ENST00000286835 A0A0J9YY99 117 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 AJUBAQ96IF1 538 aa10.1□□□□□ -0.79
SCAF4-201ENST00000286835 DUX3Q96PT4 197 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 GATA3P23771 443 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 SYNJ2BPP57105 145 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 EBI3Q14213 229 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 Q6ZUT4 128 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 TRAV8-4A0A0B4J246 113 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 CFC1P0CG37 223 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 SS18L2Q9UHA2 77 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 RELNP78509 3460 aa10.09□□□□□ -0.79
SCAF4-201ENST00000286835 RNASE3P12724 160 aaKnown RBP10.08□□□□□ -0.8
SCAF4-201ENST00000286835 EDN2P20800 178 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 DEFB113Q30KQ7 82 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
SCAF4-201ENST00000286835 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 XGP55808 180 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 LMO4P61968 165 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 NFE4Q86UQ8 179 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 USMG5Q96IX5 58 aa10.08□□□□□ -0.8
SCAF4-201ENST00000286835 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 B5MCH6 92 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 IGHV3-16A0A0C4DH30 117 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 RNF183Q96D59 192 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 TRAV8-3A0A0A6YYJ7 113 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 ATXN8Q156A1 80 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 M0R2P5 195 aa10.07□□□□□ -0.8
SCAF4-201ENST00000286835 MEIG1Q5JSS6 88 aa10.06□□□□□ -0.8
SCAF4-201ENST00000286835 Q8N1Y9 231 aa10.06□□□□□ -0.8
SCAF4-201ENST00000286835 DAND5Q8N907 189 aa10.06□□□□□ -0.8
SCAF4-201ENST00000286835 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
SCAF4-201ENST00000286835 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
SCAF4-201ENST00000286835 CFAP46Q8IYW2 2715 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 P0DMU3 169 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 ZNF575Q86XF7 245 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
SCAF4-201ENST00000286835 IGHV1OR15-1A0A075B7D0 117 aa10.04□□□□□ -0.8
SCAF4-201ENST00000286835 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
SCAF4-201ENST00000286835 I3L3M4 83 aa10.04□□□□□ -0.8
SCAF4-201ENST00000286835 NDUFA12Q9UI09 145 aa10.04□□□□□ -0.8
SCAF4-201ENST00000286835 LINC01587Q99440 93 aa10.04□□□□□ -0.8
SCAF4-201ENST00000286835 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
SCAF4-201ENST00000286835 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-201ENST00000286835 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-201ENST00000286835 C11orf71Q6IPW1 123 aa10.03□□□□□ -0.8
SCAF4-201ENST00000286835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-201ENST00000286835 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
SCAF4-201ENST00000286835 ZNF580Q9UK33 172 aa10.03□□□□□ -0.8
SCAF4-201ENST00000286835 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.8
SCAF4-201ENST00000286835 GPHB5Q86YW7 130 aa10.02□□□□□ -0.8
SCAF4-201ENST00000286835 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.8
SCAF4-201ENST00000286835 PRO0461Q9UI25 63 aa10.02□□□□□ -0.8
SCAF4-201ENST00000286835 A8MZ25 164 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 IGHV3-30P01768 117 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 PRM2P04554 102 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 IGHV3-30-5P0DP03 117 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 DEFB131AP59861 70 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 H3BMM0 161 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 CRYGDP07320 174 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 UBE2D1P51668 147 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 UBE2WQ96B02 151 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
SCAF4-201ENST00000286835 SPENQ96T58 3664 aaKnown RBP10.01□□□□□ -0.81
SCAF4-201ENST00000286835 C10orf99Q6UWK7 81 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 LINC01546A6NGU7 62 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 LEPROTO15243 131 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
SCAF4-201ENST00000286835 IGHV3-53P01767 116 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms