RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
CD44-204ENST00000279452 TIRAPP58753 221 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 LINC00315P59091 139 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 UBE2D3P61077 147 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 UBE2D2P62837 147 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 PNRC1Q12796 327 aaPredicted RBP4.46□□□□□ -1.7
CD44-204ENST00000279452 RIGQ13278 110 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 WDR73Q6P4I2 378 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 RASL11AQ6T310 242 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 C10orf126Q8N4M7 172 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 CHCHD5Q9BSY4 110 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 Q9HAA7 133 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 MUC4Q99102 2169 aa4.46□□□□□ -1.7
CD44-204ENST00000279452 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 A0A087WX48 190 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 M0QY20 66 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 PPP1R2P9O14990 202 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 PSCAO43653 123 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 DNAH10OSP0CZ25 163 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 CAMPP49913 170 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
CD44-204ENST00000279452 UQCC3Q6UW78 93 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 DAZ4Q86SG3 579 aaKnown RBP4.45□□□□□ -1.7
CD44-204ENST00000279452 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 DNAJC30Q96LL9 226 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 CNFNQ9BYD5 112 aa4.45□□□□□ -1.7
CD44-204ENST00000279452 DAZ3Q9NR90 486 aaKnown RBP4.45□□□□□ -1.7
CD44-204ENST00000279452 DNAH7Q8WXX0 4024 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 TRBV25-1A0A075B6N4 114 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 TRBV6-8A0A0A6YYG3 113 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 TMEM97Q5BJF2 176 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 AMN1Q8IY45 258 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 Q8N3U1 123 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
CD44-204ENST00000279452 NIT2Q9NQR4 276 aa4.44□□□□□ -1.7
CD44-204ENST00000279452 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CD44-204ENST00000279452 RYR3Q15413 4870 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 IGHV1-24A0A0C4DH33 117 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 SMIM27A0A1W2PRY6 76 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 TMEM218A2RU14 115 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 A6NJY4 79 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 K7EP13 123 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 UBE2L6O14933 153 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 NCR2O95944 276 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 CRPP02741 224 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 S100A8P05109 93 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 AMTP48728 403 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 HBBP68871 147 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 TNP2Q05952 138 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 GAGE6Q13070 117 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 COTL1Q14019 142 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 LINC00528Q8N1L1 170 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 ANAPC16Q96DE5 110 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 TMEM191AQ9H0A3 160 aa4.43□□□□□ -1.7
CD44-204ENST00000279452 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 RYR2Q92736 4967 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 A0A1B0GW15 77 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 EREGO14944 169 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 ANGP03950 147 aaKnown RBP4.42□□□□□ -1.7
CD44-204ENST00000279452 ADCYAP1P18509 176 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 PMCHP20382 165 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 PKIAP61925 76 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 ELOBQ15370 118 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 CLPSL2Q6UWE3 100 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 NIT1Q86X76 327 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 MRAP2Q96G30 205 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 TMEM243Q9BU79 118 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 SEC11CQ9BY50 192 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 ST20Q9HBF5 79 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 KLK12Q9UKR0 248 aa4.42□□□□□ -1.7
CD44-204ENST00000279452 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
CD44-204ENST00000279452 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 SDHAF1A6NFY7 115 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 IBA57-AS1B1ANH7 110 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 GAS8-AS1O95177 125 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 APCSP02743 223 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 BTF3P20290 206 aaKnown RBP4.41□□□□□ -1.7
CD44-204ENST00000279452 RAB4AP20338 218 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 S100PP25815 95 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 FCER1GP30273 86 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 CKS2P33552 79 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 NDUFA5Q16718 116 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 MPV17L2Q567V2 206 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 AMMECR1LQ6DCA0 310 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 Q8N976 141 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 FRZBQ92765 325 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 RMI2Q96E14 147 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 RNF185Q96GF1 192 aa4.41□□□□□ -1.7
CD44-204ENST00000279452 IGKV2D-24A0A075B6R9 120 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms