RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RNASE8Q8TDE3 154 aaKnown RBP17.62■□□□□ 0.41
SSBP4-201ENST00000270061 IGHV3OR16-12A0A075B7B8 117 aa17.61■□□□□ 0.41
SSBP4-201ENST00000270061 A8MWV9 139 aa17.61■□□□□ 0.41
SSBP4-201ENST00000270061 ZNF705AQ6ZN79 300 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-201ENST00000270061 TMEM263Q8WUH6 116 aaKnown RBP17.61■□□□□ 0.41
SSBP4-201ENST00000270061 SACSQ9NZJ4 4579 aa17.6■□□□□ 0.41
SSBP4-201ENST00000270061 LEPROTL1O95214 131 aa17.6■□□□□ 0.41
SSBP4-201ENST00000270061 SUMO4Q6EEV6 95 aa17.6■□□□□ 0.41
SSBP4-201ENST00000270061 C3orf79P0CE67 100 aa17.59■□□□□ 0.41
SSBP4-201ENST00000270061 SUMO2P61956 95 aaKnown RBP17.59■□□□□ 0.41
SSBP4-201ENST00000270061 KRTDAPP60985 99 aa17.58■□□□□ 0.41
SSBP4-201ENST00000270061 CDPF1Q6NVV7 123 aa17.58■□□□□ 0.41
SSBP4-201ENST00000270061 OR11H2Q8NH07 326 aa17.58■□□□□ 0.41
SSBP4-201ENST00000270061 A0A096LNJ9 63 aa17.58■□□□□ 0.4
SSBP4-201ENST00000270061 SCGB1D1O95968 90 aa17.58■□□□□ 0.4
SSBP4-201ENST00000270061 RPL32P62910 135 aaKnown RBP17.58■□□□□ 0.4
SSBP4-201ENST00000270061 FAM74A4Q5TZK3 123 aa17.58■□□□□ 0.4
SSBP4-201ENST00000270061 RPL39LQ96EH5 51 aaKnown RBP17.58■□□□□ 0.4
SSBP4-201ENST00000270061 SMIM2Q9BVW6 85 aa17.58■□□□□ 0.4
SSBP4-201ENST00000270061 HSPB8Q9UJY1 196 aa17.58■□□□□ 0.4
SSBP4-201ENST00000270061 F5H697 171 aa17.57■□□□□ 0.4
SSBP4-201ENST00000270061 UFSP1Q6NVU6 142 aa17.56■□□□□ 0.4
SSBP4-201ENST00000270061 C16orf74Q96GX8 76 aa17.56■□□□□ 0.4
SSBP4-201ENST00000270061 TRBV6-5A0A0K0K1A5 114 aa17.55■□□□□ 0.4
SSBP4-201ENST00000270061 K7EMI3 77 aa17.55■□□□□ 0.4
SSBP4-201ENST00000270061 M0QY20 66 aa17.55■□□□□ 0.4
SSBP4-201ENST00000270061 HBDP02042 147 aa17.55■□□□□ 0.4
SSBP4-201ENST00000270061 BTF3P20290 206 aaKnown RBP17.55■□□□□ 0.4
SSBP4-201ENST00000270061 ZNF56Q15929 161 aa17.55■□□□□ 0.4
SSBP4-201ENST00000270061 DAZ2Q13117 558 aaKnown RBP17.54■□□□□ 0.4
SSBP4-201ENST00000270061 Q8N976 141 aa17.54■□□□□ 0.4
SSBP4-201ENST00000270061 RS1O15537 224 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 FCER1GP30273 86 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 LGALS9BQ3B8N2 356 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 CFAP126Q5VTH2 177 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 PLECQ15149 4684 aaKnown RBP17.53■□□□□ 0.4
SSBP4-201ENST00000270061 RHODO00212 210 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 RRN3P1Q2M238 152 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 TMEM70Q9BUB7 260 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 ST20Q9HBF5 79 aa17.53■□□□□ 0.4
SSBP4-201ENST00000270061 MRPL16Q9NX20 251 aaKnown RBP17.53■□□□□ 0.4
SSBP4-201ENST00000270061 LCE6AA0A183 80 aa17.52■□□□□ 0.4
SSBP4-201ENST00000270061 LAGE3Q14657 143 aa17.52■□□□□ 0.4
SSBP4-201ENST00000270061 LINC00173Q6ZV60 143 aa17.52■□□□□ 0.4
SSBP4-201ENST00000270061 PLAC8L1A1L4L8 177 aa17.51■□□□□ 0.39
SSBP4-201ENST00000270061 POLR2KP53803 58 aaKnown RBP17.51■□□□□ 0.39
SSBP4-201ENST00000270061 C11orf68Q9H3H3 251 aaKnown RBP17.51■□□□□ 0.39
SSBP4-201ENST00000270061 RYR2Q92736 4967 aa17.51■□□□□ 0.39
SSBP4-201ENST00000270061 MAP1LC3CQ9BXW4 147 aa17.51■□□□□ 0.39
SSBP4-201ENST00000270061 H7C1H1 209 aa17.5■□□□□ 0.39
SSBP4-201ENST00000270061 S100A12P80511 92 aa17.5■□□□□ 0.39
SSBP4-201ENST00000270061 ZFP2Q6ZN57 461 aa17.5■□□□□ 0.39
SSBP4-201ENST00000270061 SYS1-DBNDD2H3BUS1 97 aa17.49■□□□□ 0.39
SSBP4-201ENST00000270061 ORMDL2Q53FV1 153 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 TEX43Q6ZNM6 134 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 TRGV1A0A0A0MS02 117 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 NUPR2A6NF83 97 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 VCYO14598 125 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 TCAPO15273 167 aa17.48■□□□□ 0.39
SSBP4-201ENST00000270061 SMIM9A6NGZ8 99 aa17.47■□□□□ 0.39
SSBP4-201ENST00000270061 DEFB4AO15263 64 aa17.47■□□□□ 0.39
SSBP4-201ENST00000270061 PET117Q6UWS5 81 aa17.47■□□□□ 0.39
SSBP4-201ENST00000270061 SPATA12Q7Z6I5 190 aa17.47■□□□□ 0.39
SSBP4-201ENST00000270061 NACAE9PAV3 2078 aa17.47■□□□□ 0.39
SSBP4-201ENST00000270061 TRBV27A0A0K0K1C4 114 aa17.46■□□□□ 0.39
SSBP4-201ENST00000270061 SDHAF1A6NFY7 115 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 Q8NAQ8 132 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 NOP10Q9NPE3 64 aaKnown RBP17.45■□□□□ 0.38
SSBP4-201ENST00000270061 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 MIFP14174 115 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 Q6ZTI0 123 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 C11orf45Q8TAV5 145 aa17.45■□□□□ 0.38
SSBP4-201ENST00000270061 IGHV3-73A0A0B4J1V6 119 aa17.44■□□□□ 0.38
SSBP4-201ENST00000270061 CEMP1Q6PRD7 247 aaPredicted RBP17.44■□□□□ 0.38
SSBP4-201ENST00000270061 DNAH1Q9P2D7 4330 aa17.44■□□□□ 0.38
SSBP4-201ENST00000270061 TRAV4A0A0B4J268 109 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 PCP4L1A6NKN8 68 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 OR4C5Q8NGB2 326 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 X6R8D5 127 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 IGHV4-28A0A0C4DH34 117 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 IFI27L1Q96BM0 104 aa17.43■□□□□ 0.38
SSBP4-201ENST00000270061 NUDT3O95989 172 aa17.42■□□□□ 0.38
SSBP4-201ENST00000270061 NANOS2P60321 138 aaKnown RBP17.42■□□□□ 0.38
SSBP4-201ENST00000270061 Q6ZSN1 163 aa17.42■□□□□ 0.38
SSBP4-201ENST00000270061 PHLDA1Q8WV24 401 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-201ENST00000270061 KIR2DL4Q99706 377 aa17.42■□□□□ 0.38
SSBP4-201ENST00000270061 ALMS1Q8TCU4 4167 aa17.41■□□□□ 0.38
SSBP4-201ENST00000270061 C20orf202A1L168 122 aa17.41■□□□□ 0.38
SSBP4-201ENST00000270061 CIDEAO60543 219 aa17.41■□□□□ 0.38
SSBP4-201ENST00000270061 G0S2P27469 103 aa17.41■□□□□ 0.38
SSBP4-201ENST00000270061 KLK5Q9Y337 293 aaPredicted RBP17.41■□□□□ 0.38
SSBP4-201ENST00000270061 ZNF664Q8N3J9 261 aa17.4■□□□□ 0.38
SSBP4-201ENST00000270061 LINC01545Q5VT33 79 aa17.4■□□□□ 0.38
SSBP4-201ENST00000270061 DNAJC30Q96LL9 226 aa17.4■□□□□ 0.38
SSBP4-201ENST00000270061 HYDINQ4G0P3 5121 aa17.39■□□□□ 0.37
SSBP4-201ENST00000270061 ATP5LO75964 103 aa17.39■□□□□ 0.37
SSBP4-201ENST00000270061 TOMM6Q96B49 74 aa17.39■□□□□ 0.37
SSBP4-201ENST00000270061 LINC01549A6NIU2 74 aa17.38■□□□□ 0.37
SSBP4-201ENST00000270061 PKIAP61925 76 aa17.38■□□□□ 0.37
SSBP4-201ENST00000270061 NEGR1Q7Z3B1 354 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms