RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 ZNF56Q15929 161 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 FAM110AQ9BQ89 295 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 XCL2Q9UBD3 114 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 A0A096LNJ9 63 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 MRPL51Q4U2R6 128 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 ANKRD29Q8N6D5 301 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 HERVK_113P61574 105 aa10.76□□□□□ -0.69
TNFRSF11A-201ENST00000269485 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 PRSS22Q9GZN4 317 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 TEN1Q86WV5 123 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 IGHV4OR15-8A0A075B7B6 117 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 A0A087WW49 117 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 OOSP1A8MZH6 123 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
TNFRSF11A-201ENST00000269485 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 PIFOQ8TCI5 191 aa10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 PDZD2O15018 2839 aa10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 PRSS2P07478 247 aa10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
TNFRSF11A-201ENST00000269485 CRLF1O75462 422 aa10.73□□□□□ -0.69
TNFRSF11A-201ENST00000269485 FSTL3O95633 263 aa10.73□□□□□ -0.69
TNFRSF11A-201ENST00000269485 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
TNFRSF11A-201ENST00000269485 FAM104BQ5XKR9 115 aa10.73□□□□□ -0.69
TNFRSF11A-201ENST00000269485 Q8N6K4 173 aa10.73□□□□□ -0.69
TNFRSF11A-201ENST00000269485 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 VCX2Q9H322 139 aa10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 SLC25A20O43772 301 aa10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 MLST8Q9BVC4 326 aa10.72□□□□□ -0.69
TNFRSF11A-201ENST00000269485 VWFP04275 2813 aa10.71□□□□□ -0.69
TNFRSF11A-201ENST00000269485 INS-IGF2F8WCM5 200 aa10.71□□□□□ -0.69
TNFRSF11A-201ENST00000269485 ATP5LO75964 103 aa10.71□□□□□ -0.69
TNFRSF11A-201ENST00000269485 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
TNFRSF11A-201ENST00000269485 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
TNFRSF11A-201ENST00000269485 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 J3QKU1 62 aa10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 PRR9Q5T870 116 aa10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 ZNF469Q96JG9 3925 aaPredicted RBP10.71□□□□□ -0.7
TNFRSF11A-201ENST00000269485 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TMEM170BQ5T4T1 132 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 PHLDA1Q8WV24 401 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 WI2-2373I1.2A0A1W2PRP0 233 aa10.7□□□□□ -0.7
TNFRSF11A-201ENST00000269485 SLC25A16P16260 332 aa10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 MYCNOSP40205 109 aa10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 CT83Q5H943 113 aa10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 LINC01587Q99440 93 aa10.69□□□□□ -0.7
TNFRSF11A-201ENST00000269485 RS1O15537 224 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 HIGD1BQ9P298 99 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TCL1BO95988 128 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 EDA2RQ9HAV5 297 aa10.68□□□□□ -0.7
TNFRSF11A-201ENST00000269485 IGHV4-31P0DP07 118 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 ESM1Q9NQ30 184 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TENM1Q9UKZ4 2725 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 ASIPP42127 132 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 VPREB3Q9UKI3 123 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
TNFRSF11A-201ENST00000269485 EBI3Q14213 229 aa10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 NXT2Q9NPJ8 142 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 DEFB4AO15263 64 aa10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 NHLRC4P0CG21 123 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
TNFRSF11A-201ENST00000269485 HTN3P15516 51 aa10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 PMVKQ15126 192 aa10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 A6NDX4 124 aa10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 MDFICQ9P1T7 246 aa10.65□□□□□ -0.7
TNFRSF11A-201ENST00000269485 IGHG2P01859 326 aa10.65□□□□□ -0.71
TNFRSF11A-201ENST00000269485 PF4P02776 101 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 P0DMU3 169 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM231AP0DMU4 169 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 FAM231CP0DMU5 169 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 NPC2P61916 151 aa10.64□□□□□ -0.71
TNFRSF11A-201ENST00000269485 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms