RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ZNF491Q8N8L2 437 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 BPESC1Q9GZL8 116 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 E9PQ18 207 aa8.75□□□□□ -1.01
CHFR-201ENST00000266880 IGHV4-30-2A0A087WSY4 118 aa8.74□□□□□ -1.01
CHFR-201ENST00000266880 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
CHFR-201ENST00000266880 SNURFQ9Y675 71 aa8.74□□□□□ -1.01
CHFR-201ENST00000266880 ENHOQ6UWT2 76 aa8.74□□□□□ -1.01
CHFR-201ENST00000266880 H3BT86 120 aa8.74□□□□□ -1.01
CHFR-201ENST00000266880 NOTCH4Q99466 2003 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 Q8N1Y9 231 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 DIRC1Q969H9 104 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 E7EQL1 145 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 K7EQD1 137 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 ZNF883P0CG24 379 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 C17orf58Q2M2W7 97 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 TMEM256-PLSCR3K7ERE1 68 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 COX7BP24311 80 aa8.73□□□□□ -1.01
CHFR-201ENST00000266880 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 Q6ZR03 302 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 K7EM74 188 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 LRRK2Q5S007 2527 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 PRR4Q16378 134 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 PRORYQ9H606 182 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
CHFR-201ENST00000266880 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.01
CHFR-201ENST00000266880 CSRP2Q16527 193 aa8.71□□□□□ -1.01
CHFR-201ENST00000266880 Q0VFX4 171 aa8.71□□□□□ -1.01
CHFR-201ENST00000266880 NDUFA1O15239 70 aa8.71□□□□□ -1.02
CHFR-201ENST00000266880 DEFB136Q30KP8 78 aa8.71□□□□□ -1.02
CHFR-201ENST00000266880 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.02
CHFR-201ENST00000266880 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
CHFR-201ENST00000266880 TM2D2Q9BX73 214 aa8.71□□□□□ -1.02
CHFR-201ENST00000266880 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.02
CHFR-201ENST00000266880 TLN1Q9Y490 2541 aaKnown RBP8.7□□□□□ -1.02
CHFR-201ENST00000266880 GNLYP22749 145 aa8.7□□□□□ -1.02
CHFR-201ENST00000266880 NDUFA11Q86Y39 141 aa8.7□□□□□ -1.02
CHFR-201ENST00000266880 TOMM6Q96B49 74 aa8.7□□□□□ -1.02
CHFR-201ENST00000266880 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
CHFR-201ENST00000266880 TMEM105Q8N8V8 129 aa8.7□□□□□ -1.02
CHFR-201ENST00000266880 MSMBP08118 114 aa8.69□□□□□ -1.02
CHFR-201ENST00000266880 FGF23Q9GZV9 251 aaPredicted RBP8.69□□□□□ -1.02
CHFR-201ENST00000266880 CTSGP08311 255 aa8.69□□□□□ -1.02
CHFR-201ENST00000266880 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
CHFR-201ENST00000266880 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
CHFR-201ENST00000266880 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
CHFR-201ENST00000266880 PDE6GP18545 87 aa8.69□□□□□ -1.02
CHFR-201ENST00000266880 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
CHFR-201ENST00000266880 COX7CP15954 63 aa8.68□□□□□ -1.02
CHFR-201ENST00000266880 TMEM89A2RUT3 159 aa8.68□□□□□ -1.02
CHFR-201ENST00000266880 FN1P02751 2386 aaKnown RBP8.68□□□□□ -1.02
CHFR-201ENST00000266880 B3GALT5-AS1P59052 145 aa8.68□□□□□ -1.02
CHFR-201ENST00000266880 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
CHFR-201ENST00000266880 DIAPH2-AS1Q14236 149 aa8.68□□□□□ -1.02
CHFR-201ENST00000266880 NDUFC1O43677 76 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 F8WDY8 70 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 PRR20EP86478 221 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 PRR20CP86479 221 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 PRR20DP86480 221 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 PRR20BP86481 221 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 PRR20AP86496 221 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 ESM1Q9NQ30 184 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 E9PLD3 99 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 SLPIP03973 132 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 ATP5EP2Q5VTU8 51 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 C16orf74Q96GX8 76 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 C15orf65H3BRN8 121 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 Q8TCH9 128 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 NCOR2Q9Y618 2525 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 MIAQ16674 131 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 COL4A1P02462 1669 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 XGP55808 180 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
CHFR-201ENST00000266880 HIVEP2P31629 2446 aa8.66□□□□□ -1.02
CHFR-201ENST00000266880 MUC6Q6W4X9 2439 aa8.66□□□□□ -1.02
CHFR-201ENST00000266880 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
CHFR-201ENST00000266880 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
CHFR-201ENST00000266880 IGLV3-19P01714 112 aa8.66□□□□□ -1.02
CHFR-201ENST00000266880 TMEM263Q8WUH6 116 aaKnown RBP8.66□□□□□ -1.02
CHFR-201ENST00000266880 SPAG11BQ08648 103 aa8.65□□□□□ -1.02
CHFR-201ENST00000266880 IGHV4-30-4P0DP06 118 aa8.65□□□□□ -1.02
CHFR-201ENST00000266880 IGHV4-31P0DP07 118 aa8.65□□□□□ -1.02
CHFR-201ENST00000266880 SLURP1P55000 103 aa8.65□□□□□ -1.03
CHFR-201ENST00000266880 GP9P14770 177 aa8.65□□□□□ -1.03
CHFR-201ENST00000266880 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.03
CHFR-201ENST00000266880 PIFOQ8TCI5 191 aa8.65□□□□□ -1.03
CHFR-201ENST00000266880 SPTBN4Q9H254 2564 aa8.65□□□□□ -1.03
CHFR-201ENST00000266880 HOXB4P17483 251 aaPredicted RBP8.64□□□□□ -1.03
CHFR-201ENST00000266880 RNF138Q8WVD3 245 aa8.64□□□□□ -1.03
CHFR-201ENST00000266880 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
CHFR-201ENST00000266880 CD59P13987 128 aa8.64□□□□□ -1.03
CHFR-201ENST00000266880 VWCEQ96DN2 955 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms