RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CDPF1Q6NVV7 123 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 E7EQL1 145 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 IGKV1-17P01599 117 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 NCOA6Q14686 2063 aaPredicted RBP4.22□□□□□ -1.73
XRN1-201ENST00000264951 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 A0A1B0GXF2 115 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 LINC00526Q96FQ7 95 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 PRB3Q04118 309 aaPredicted RBP4.22□□□□□ -1.73
XRN1-201ENST00000264951 RSPO4Q2I0M5 234 aaPredicted RBP4.22□□□□□ -1.73
XRN1-201ENST00000264951 SIPA1L1O43166 1804 aa4.22□□□□□ -1.73
XRN1-201ENST00000264951 G3V318 75 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 MLST8Q9BVC4 326 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 HHLA3Q9XRX5 114 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 WDR81Q562E7 1941 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 CCL24O00175 119 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 LYPD2Q6UXB3 125 aa4.21□□□□□ -1.73
XRN1-201ENST00000264951 AGRNO00468 2067 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 CFHR3Q02985 330 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 MUC4Q99102 2169 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 C19orf71A6NCJ1 209 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 I3L2K1 104 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 COL8A2P25067 703 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 WDR86Q86TI4 376 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 MIFP14174 115 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 TANC2Q9HCD6 1990 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 IGKV2D-26A0A0A0MRZ7 120 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 COLQQ9Y215 455 aaPredicted RBP4.21□□□□□ -1.74
XRN1-201ENST00000264951 RPL39LQ96EH5 51 aaKnown RBP4.21□□□□□ -1.74
XRN1-201ENST00000264951 PINLYPA6NC86 204 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 GNRH2O43555 120 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
XRN1-201ENST00000264951 A0A0J9YX75 114 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 ENHOQ6UWT2 76 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.2□□□□□ -1.74
XRN1-201ENST00000264951 Q6ZSR3 168 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 NAV2Q8IVL1 2488 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 LST1O00453 97 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 FHL1Q13642 323 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 SDIM1Q6ZPB5 146 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 K7EIM0 57 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 BRWD3Q6RI45 1802 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 CTSGP08311 255 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 GREB1LQ9C091 1923 aaPredicted RBP4.2□□□□□ -1.74
XRN1-201ENST00000264951 CCKP06307 115 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 RBX1P62877 108 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 SBF1O95248 1867 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 M0QXV9 152 aa4.2□□□□□ -1.74
XRN1-201ENST00000264951 TLN2Q9Y4G6 2542 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 NEXN-AS1Q8NBZ9 246 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 TFF1P04155 84 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 MYCNOSP40205 109 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
XRN1-201ENST00000264951 LINC00308Q8TCZ7 52 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 DENND4AQ7Z401 1863 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 UBE2D3P61077 147 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 ZFAND2AQ8N6M9 145 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 PCNTO95613 3336 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 IGHV3-33P01772 117 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 CXCL6P80162 114 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 PLXNA4Q9HCM2 1894 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 TSC2P49815 1807 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 IGHV4-4A0A075B6R2 117 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 PIEZO1Q92508 2521 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 OBSL1O75147 1896 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 TRBV27A0A0K0K1C4 114 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 ASPHD1Q5U4P2 390 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 CFAP126Q5VTH2 177 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 DEFB104AQ8WTQ1 72 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 Q6ZQT7 251 aa4.19□□□□□ -1.74
XRN1-201ENST00000264951 TCF20Q9UGU0 1960 aaKnown RBP4.19□□□□□ -1.74
XRN1-201ENST00000264951 BCE1O60756 84 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 PRR31Q5SQ13 230 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 LOC107984640A0A0U1RRK4 108 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 CLPSL2Q6UWE3 100 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 LINC00322Q6ZN03 302 aaPredicted RBP4.18□□□□□ -1.74
XRN1-201ENST00000264951 LINC00474Q9P2X8 69 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 A0A0J9YY99 117 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 Q9HAA7 133 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 TICRRQ7Z2Z1 1910 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 Q6ZR03 302 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 A0A1B0GW54 56 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 FSTL3O95633 263 aa4.18□□□□□ -1.74
XRN1-201ENST00000264951 LINC01548A6NM66 108 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 F8WDY8 70 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 NFE4Q86UQ8 179 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 RPL39P62891 51 aaKnown RBP4.17□□□□□ -1.74
XRN1-201ENST00000264951 VWCEQ96DN2 955 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 PLXNA3P51805 1871 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 MUC6Q6W4X9 2439 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 FN1P02751 2386 aaKnown RBP4.17□□□□□ -1.74
XRN1-201ENST00000264951 IGHV7-81A0A0B4J1V7 117 aa4.17□□□□□ -1.74
XRN1-201ENST00000264951 DIAPH2-AS1Q14236 149 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms