RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 KHDC1LQ5JSQ8 128 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 GAGE2AQ6NT46 116 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 HOXD3P31249 432 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 CCDC140Q96MF4 163 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 P0DMU3 169 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 KLK5Q9Y337 293 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-201ENST00000261897 SPTBN4Q9H254 2564 aa12.02□□□□□ -0.48
PRPF40B-201ENST00000261897 CLPSL1A2RUU4 121 aa12.02□□□□□ -0.48
PRPF40B-201ENST00000261897 CRYGDP07320 174 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 Q6ZS92 163 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 PPDPFQ9H3Y8 114 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 ICOSQ9Y6W8 199 aa12.01□□□□□ -0.49
PRPF40B-201ENST00000261897 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
PRPF40B-201ENST00000261897 Q8N9W7 124 aa12□□□□□ -0.49
PRPF40B-201ENST00000261897 MDFICQ9P1T7 246 aa12□□□□□ -0.49
PRPF40B-201ENST00000261897 TNFRSF18Q9Y5U5 241 aa12□□□□□ -0.49
PRPF40B-201ENST00000261897 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
PRPF40B-201ENST00000261897 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 ZFAND3Q9H8U3 227 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 OOSP1A8MZH6 123 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 TSHBP01222 138 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 FAM110DQ8TAY7 271 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 TRAV13-1A0A0B4J241 112 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 LOC107984640A0A0U1RRK4 108 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 PRM2P04554 102 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 YAE1D1Q9NRH1 226 aa11.99□□□□□ -0.49
PRPF40B-201ENST00000261897 OVOL1O14753 267 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 ZNF575Q86XF7 245 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 NPBQ8NG41 125 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
PRPF40B-201ENST00000261897 M0QXV9 152 aa11.97□□□□□ -0.49
PRPF40B-201ENST00000261897 COX6B1P14854 86 aa11.97□□□□□ -0.49
PRPF40B-201ENST00000261897 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
PRPF40B-201ENST00000261897 TMEM141Q96I45 108 aa11.97□□□□□ -0.49
PRPF40B-201ENST00000261897 LY6LH3BQJ8 138 aa11.96□□□□□ -0.49
PRPF40B-201ENST00000261897 M0R1W7 72 aa11.96□□□□□ -0.49
PRPF40B-201ENST00000261897 RNASE3P12724 160 aaKnown RBP11.96□□□□□ -0.5
PRPF40B-201ENST00000261897 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.5
PRPF40B-201ENST00000261897 ODF3Q96PU9 254 aa11.96□□□□□ -0.5
PRPF40B-201ENST00000261897 LEPROTO15243 131 aa11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 EDN2P20800 178 aa11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 TMEM263Q8WUH6 116 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 ABCA2Q9BZC7 2435 aa11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 LGALS9O00182 355 aa11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 IGFL2Q6UWQ7 119 aa11.95□□□□□ -0.5
PRPF40B-201ENST00000261897 MUC4Q99102 2169 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 H7C423 109 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 PROK1P58294 105 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 IGKV3D-7A0A0C4DH55 119 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 DCHS2Q6V1P9 2916 aa11.94□□□□□ -0.5
PRPF40B-201ENST00000261897 TRBV7-1A0A0A6YYK4 115 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 TNFRSF13BO14836 293 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 Q9HAA7 133 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 NAV2Q8IVL1 2488 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 PIEZO1Q92508 2521 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 PKD1L2Q7Z442 2459 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 NXPH4O95158 308 aa11.93□□□□□ -0.5
PRPF40B-201ENST00000261897 I3L3M4 83 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 HIST1H4AP62805 103 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 GPHB5Q86YW7 130 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 NPFFO15130 113 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 DNAL4O96015 105 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 ADAMTSL4-AS1Q5T5F5 129 aa11.92□□□□□ -0.5
PRPF40B-201ENST00000261897 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
PRPF40B-201ENST00000261897 RHOHQ15669 191 aa11.91□□□□□ -0.5
PRPF40B-201ENST00000261897 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
PRPF40B-201ENST00000261897 MINOS1Q5TGZ0 78 aa11.91□□□□□ -0.5
PRPF40B-201ENST00000261897 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-201ENST00000261897 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
PRPF40B-201ENST00000261897 ATP5J2P56134 94 aa11.9□□□□□ -0.5
PRPF40B-201ENST00000261897 NSUN5P1Q3KNT7 163 aa11.9□□□□□ -0.5
PRPF40B-201ENST00000261897 LINC01619G3V211 115 aa11.9□□□□□ -0.51
PRPF40B-201ENST00000261897 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.51
PRPF40B-201ENST00000261897 BPESC1Q9GZL8 116 aa11.9□□□□□ -0.51
PRPF40B-201ENST00000261897 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 PSMG3-AS1Q96PY0 264 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 TIMM17AQ99595 171 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 ZFYVE26Q68DK2 2539 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
PRPF40B-201ENST00000261897 TINCRA0A1B0GVN0 87 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms