RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 VSIG2Q96IQ7 327 aa10.53□□□□□ -0.72
CDH1-201ENST00000261769 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 HERV-K104P63124 156 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 RNF183Q96D59 192 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 FGF6P10767 208 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
CDH1-201ENST00000261769 CTRLP40313 264 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 ZFP2Q6ZN57 461 aa10.52□□□□□ -0.73
CDH1-201ENST00000261769 DEFB131BA0A096LNP1 70 aa10.51□□□□□ -0.73
CDH1-201ENST00000261769 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
CDH1-201ENST00000261769 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
CDH1-201ENST00000261769 TRAV13-2A0A0B4J235 113 aa10.5□□□□□ -0.73
CDH1-201ENST00000261769 C14orf177Q52M58 125 aa10.5□□□□□ -0.73
CDH1-201ENST00000261769 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
CDH1-201ENST00000261769 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
CDH1-201ENST00000261769 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 PKD1L2Q7Z442 2459 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 SETD2Q9BYW2 2564 aaPredicted RBP10.49□□□□□ -0.73
CDH1-201ENST00000261769 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 TRAV26-1A0A087WT03 109 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 RPL18AQ02543 176 aaKnown RBP10.49□□□□□ -0.73
CDH1-201ENST00000261769 MPV17L2Q567V2 206 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
CDH1-201ENST00000261769 NDUFA1O15239 70 aa10.48□□□□□ -0.73
CDH1-201ENST00000261769 TAL2Q16559 108 aa10.48□□□□□ -0.73
CDH1-201ENST00000261769 Q6ZTI0 123 aa10.48□□□□□ -0.73
CDH1-201ENST00000261769 ARHGAP32A7KAX9 2087 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 Q9H8V8 135 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 ZNF747Q9BV97 191 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 TIRAPP58753 221 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 BOD1L2Q8IYS8 172 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 KIAA1549Q9HCM3 1950 aa10.47□□□□□ -0.73
CDH1-201ENST00000261769 PYY3Q5JQD4 70 aa10.46□□□□□ -0.73
CDH1-201ENST00000261769 TRAV10A0A0B4J240 114 aa10.46□□□□□ -0.73
CDH1-201ENST00000261769 CXCL5P42830 114 aa10.46□□□□□ -0.74
CDH1-201ENST00000261769 KIR3DS1Q14943 382 aa10.46□□□□□ -0.74
CDH1-201ENST00000261769 GTSF1Q8WW33 167 aa10.46□□□□□ -0.74
CDH1-201ENST00000261769 A0A1B0GV72 72 aa10.45□□□□□ -0.74
CDH1-201ENST00000261769 Q6ZS46 218 aa10.45□□□□□ -0.74
CDH1-201ENST00000261769 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
CDH1-201ENST00000261769 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
CDH1-201ENST00000261769 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 DLEU1O43261 78 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
CDH1-201ENST00000261769 CENPFP49454 3210 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 PRSS47A8MTI9 375 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 DKK2Q9UBU2 259 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 MTORP42345 2549 aa10.43□□□□□ -0.74
CDH1-201ENST00000261769 COX8AP10176 69 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 C16orf95Q9H693 158 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 GTSF1LQ9H1H1 148 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 OXLD1Q5BKU9 147 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
CDH1-201ENST00000261769 C20orf203Q8NBC4 194 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 NAA38Q9BRA0 125 aaKnown RBP10.41□□□□□ -0.74
CDH1-201ENST00000261769 IFITM1P13164 125 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
CDH1-201ENST00000261769 GAGE2BQ13066 116 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 C18orf65Q6ZTR6 163 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 MRPL52Q86TS9 123 aaKnown RBP10.41□□□□□ -0.74
CDH1-201ENST00000261769 ZNF580Q9UK33 172 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 POLQO75417 2590 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
CDH1-201ENST00000261769 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
CDH1-201ENST00000261769 CCL25O15444 150 aa10.4□□□□□ -0.74
CDH1-201ENST00000261769 INAFM2P0DMQ5 153 aa10.4□□□□□ -0.74
CDH1-201ENST00000261769 CRIP2P52943 208 aaPredicted RBP10.4□□□□□ -0.74
CDH1-201ENST00000261769 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 IGHV4-28A0A0C4DH34 117 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 RPL39P62891 51 aaKnown RBP10.39□□□□□ -0.75
CDH1-201ENST00000261769 MTURNQ8N3F0 131 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 FLNBO75369 2602 aaKnown RBP10.39□□□□□ -0.75
CDH1-201ENST00000261769 C9JAW5 83 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 SOCS3O14543 225 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
CDH1-201ENST00000261769 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
CDH1-201ENST00000261769 CRYGDP07320 174 aa10.38□□□□□ -0.75
CDH1-201ENST00000261769 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
CDH1-201ENST00000261769 HIST2H2BDQ6DRA6 164 aa10.38□□□□□ -0.75
CDH1-201ENST00000261769 LINC01545Q5VT33 79 aa10.37□□□□□ -0.75
CDH1-201ENST00000261769 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
CDH1-201ENST00000261769 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms