RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 PRO0255Q9UI72 69 aa13.55□□□□□ -0.24
SBDS-201ENST00000246868 DNAH9Q9NYC9 4486 aa13.55□□□□□ -0.24
SBDS-201ENST00000246868 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 F5H768 121 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
SBDS-201ENST00000246868 RHOHQ15669 191 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 C20orf78Q9BR46 151 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 TMA7Q9Y2S6 64 aaKnown RBP13.54□□□□□ -0.24
SBDS-201ENST00000246868 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 PRKDCP78527 4128 aaKnown RBP13.54□□□□□ -0.24
SBDS-201ENST00000246868 COL7A1Q02388 2944 aa13.54□□□□□ -0.24
SBDS-201ENST00000246868 HOXA5P20719 270 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 Q6ZTC4 211 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 BAGE3Q86Y29 109 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 P0DMU3 169 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 FAM231AP0DMU4 169 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 FAM231CP0DMU5 169 aa13.53□□□□□ -0.24
SBDS-201ENST00000246868 SUMO2P61956 95 aaKnown RBP13.53□□□□□ -0.24
SBDS-201ENST00000246868 TRBV6-5A0A0K0K1A5 114 aa13.52□□□□□ -0.25
SBDS-201ENST00000246868 LOC389332A0A1B0GUA5 103 aa13.52□□□□□ -0.25
SBDS-201ENST00000246868 RPL36AP83881 106 aaKnown RBP13.52□□□□□ -0.25
SBDS-201ENST00000246868 Q0VG73 95 aa13.52□□□□□ -0.25
SBDS-201ENST00000246868 RPL36ALQ969Q0 106 aaKnown RBP13.52□□□□□ -0.25
SBDS-201ENST00000246868 STAB2Q8WWQ8 2551 aa13.52□□□□□ -0.25
SBDS-201ENST00000246868 PAX4O43316 350 aa13.51□□□□□ -0.25
SBDS-201ENST00000246868 CRYBA4P53673 196 aa13.51□□□□□ -0.25
SBDS-201ENST00000246868 IQCJQ1A5X6 159 aa13.51□□□□□ -0.25
SBDS-201ENST00000246868 NEXN-AS1Q8NBZ9 246 aa13.51□□□□□ -0.25
SBDS-201ENST00000246868 PRSS3P2Q8NHM4 247 aa13.51□□□□□ -0.25
SBDS-201ENST00000246868 S100A6P06703 90 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 PMCHP20382 165 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
SBDS-201ENST00000246868 TRBV7-3A0A075B6L6 115 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 SDHAF1A6NFY7 115 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 NDUFA6P56556 154 aa13.5□□□□□ -0.25
SBDS-201ENST00000246868 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
SBDS-201ENST00000246868 TMEM70Q9BUB7 260 aa13.49□□□□□ -0.25
SBDS-201ENST00000246868 SMIM2Q9BVW6 85 aa13.49□□□□□ -0.25
SBDS-201ENST00000246868 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
SBDS-201ENST00000246868 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
SBDS-201ENST00000246868 VCYO14598 125 aa13.48□□□□□ -0.25
SBDS-201ENST00000246868 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
SBDS-201ENST00000246868 FA2HQ7L5A8 372 aa13.48□□□□□ -0.25
SBDS-201ENST00000246868 Q9UF83 564 aa13.48□□□□□ -0.25
SBDS-201ENST00000246868 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 GYPEP15421 78 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
SBDS-201ENST00000246868 GAGE1Q13065 139 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 GAGE4Q13068 117 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 GAGE5Q13069 117 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 GAGE13Q4V321 117 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 Q8N8P6 123 aa13.47□□□□□ -0.25
SBDS-201ENST00000246868 A0A0J9YY99 117 aa13.46□□□□□ -0.25
SBDS-201ENST00000246868 LINC00614P0C842 121 aa13.46□□□□□ -0.25
SBDS-201ENST00000246868 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.25
SBDS-201ENST00000246868 RNASEKQ6P5S7 137 aaKnown RBP13.46□□□□□ -0.25
SBDS-201ENST00000246868 NIT1Q86X76 327 aa13.46□□□□□ -0.25
SBDS-201ENST00000246868 KIR2DL4Q99706 377 aa13.46□□□□□ -0.25
SBDS-201ENST00000246868 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
SBDS-201ENST00000246868 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.26
SBDS-201ENST00000246868 LOC100131303A0A0U1RQF7 123 aa13.46□□□□□ -0.26
SBDS-201ENST00000246868 I3L3M4 83 aa13.45□□□□□ -0.26
SBDS-201ENST00000246868 SERF1AO75920 110 aa13.45□□□□□ -0.26
SBDS-201ENST00000246868 COA6Q5JTJ3 125 aaKnown RBP13.45□□□□□ -0.26
SBDS-201ENST00000246868 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
SBDS-201ENST00000246868 CHCHD1Q96BP2 118 aaKnown RBP13.45□□□□□ -0.26
SBDS-201ENST00000246868 VSIG2Q96IQ7 327 aa13.45□□□□□ -0.26
SBDS-201ENST00000246868 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
SBDS-201ENST00000246868 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
SBDS-201ENST00000246868 UBE2D3P61077 147 aa13.44□□□□□ -0.26
SBDS-201ENST00000246868 UBE2D2P62837 147 aa13.44□□□□□ -0.26
SBDS-201ENST00000246868 K7EMI3 77 aa13.43□□□□□ -0.26
SBDS-201ENST00000246868 TCAPO15273 167 aa13.43□□□□□ -0.26
SBDS-201ENST00000246868 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
SBDS-201ENST00000246868 IGLV2-18A0A075B6J9 118 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 H3BNG1 76 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 HSBP1O75506 76 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 FCER1GP30273 86 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
SBDS-201ENST00000246868 ICOSQ9Y6W8 199 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 MRPL23Q16540 153 aaKnown RBP13.42□□□□□ -0.26
SBDS-201ENST00000246868 SH2D6Q7Z4S9 175 aa13.42□□□□□ -0.26
SBDS-201ENST00000246868 COTL1Q14019 142 aa13.41□□□□□ -0.26
SBDS-201ENST00000246868 LAGE3Q14657 143 aa13.41□□□□□ -0.26
SBDS-201ENST00000246868 URB1-AS1Q96HZ7 61 aa13.41□□□□□ -0.26
SBDS-201ENST00000246868 IGHV3-38A0A0C4DH36 116 aa13.4□□□□□ -0.26
SBDS-201ENST00000246868 LINC00694P0DN24 101 aa13.4□□□□□ -0.26
SBDS-201ENST00000246868 ORMDL2Q53FV1 153 aa13.4□□□□□ -0.26
SBDS-201ENST00000246868 ATP6V0E2Q8NHE4 81 aa13.4□□□□□ -0.26
SBDS-201ENST00000246868 LINC01546A6NGU7 62 aa13.39□□□□□ -0.27
SBDS-201ENST00000246868 SNRPEP62304 92 aaKnown RBP13.39□□□□□ -0.27
SBDS-201ENST00000246868 LINC00310P59036 64 aa13.39□□□□□ -0.27
SBDS-201ENST00000246868 TSHBP01222 138 aa13.38□□□□□ -0.27
SBDS-201ENST00000246868 ESDP10768 282 aa13.38□□□□□ -0.27
SBDS-201ENST00000246868 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
SBDS-201ENST00000246868 NUPR1O60356 82 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms