RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 GAGE5Q13069 117 aa14.01□□□□□ -0.17
SNRPA-201ENST00000243563 GAGE13Q4V321 117 aa14.01□□□□□ -0.17
SNRPA-201ENST00000243563 NRACQ8N912 160 aa14.01□□□□□ -0.17
SNRPA-201ENST00000243563 A0A096LPF7 62 aa14□□□□□ -0.17
SNRPA-201ENST00000243563 MRAP2Q96G30 205 aa14□□□□□ -0.17
SNRPA-201ENST00000243563 APCSP02743 223 aa13.99□□□□□ -0.17
SNRPA-201ENST00000243563 PRADC1Q9BSG0 188 aa13.99□□□□□ -0.17
SNRPA-201ENST00000243563 NUPR2A6NF83 97 aa13.98□□□□□ -0.17
SNRPA-201ENST00000243563 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
SNRPA-201ENST00000243563 FRZBQ92765 325 aa13.98□□□□□ -0.17
SNRPA-201ENST00000243563 TRAPPC1Q9Y5R8 145 aa13.98□□□□□ -0.17
SNRPA-201ENST00000243563 NUDT3O95989 172 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 NPYP01303 97 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 RAB5AP20339 215 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 CKS2P33552 79 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 FABP9Q0Z7S8 132 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 TRBV10-1A0A0K0K1A3 114 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 H3BNG1 76 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 MT-ND6P03923 174 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 COX19Q49B96 90 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 DEFB104AQ8WTQ1 72 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 NIT2Q9NQR4 276 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 APLNQ9ULZ1 77 aa13.97□□□□□ -0.17
SNRPA-201ENST00000243563 OR10J3Q5JRS4 329 aa13.96□□□□□ -0.17
SNRPA-201ENST00000243563 TENM2Q9NT68 2774 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 IGHV3-38A0A0C4DH36 116 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 H7C1H1 209 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 UBE2D3P61077 147 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 UBE2D2P62837 147 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 NEGR1Q7Z3B1 354 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 PRELID3AQ96N28 172 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 ICOSQ9Y6W8 199 aa13.95□□□□□ -0.18
SNRPA-201ENST00000243563 TRBV7-3A0A075B6L6 115 aa13.94□□□□□ -0.18
SNRPA-201ENST00000243563 PHOX2AO14813 284 aa13.94□□□□□ -0.18
SNRPA-201ENST00000243563 TNFRSF6BO95407 300 aa13.94□□□□□ -0.18
SNRPA-201ENST00000243563 ORMDL3Q8N138 153 aa13.94□□□□□ -0.18
SNRPA-201ENST00000243563 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.94□□□□□ -0.18
SNRPA-201ENST00000243563 LYSTQ99698 3801 aa13.94□□□□□ -0.18
SNRPA-201ENST00000243563 TRGC2P03986 189 aa13.93□□□□□ -0.18
SNRPA-201ENST00000243563 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
SNRPA-201ENST00000243563 CASC10Q5T4H9 136 aa13.93□□□□□ -0.18
SNRPA-201ENST00000243563 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
SNRPA-201ENST00000243563 TRBV6-5A0A0K0K1A5 114 aa13.93□□□□□ -0.18
SNRPA-201ENST00000243563 ALKBH7Q9BT30 221 aaPredicted RBP13.93□□□□□ -0.18
SNRPA-201ENST00000243563 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
SNRPA-201ENST00000243563 TNFRSF18Q9Y5U5 241 aa13.93□□□□□ -0.18
SNRPA-201ENST00000243563 SRIP30626 198 aa13.92□□□□□ -0.18
SNRPA-201ENST00000243563 MRPL23Q16540 153 aaKnown RBP13.92□□□□□ -0.18
SNRPA-201ENST00000243563 C15orf53Q8NAA6 179 aa13.92□□□□□ -0.18
SNRPA-201ENST00000243563 DNAJC30Q96LL9 226 aa13.92□□□□□ -0.18
SNRPA-201ENST00000243563 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
SNRPA-201ENST00000243563 PPBPP02775 128 aa13.91□□□□□ -0.18
SNRPA-201ENST00000243563 POLR2KP53803 58 aaKnown RBP13.9□□□□□ -0.18
SNRPA-201ENST00000243563 ATP6V0E2Q8NHE4 81 aa13.9□□□□□ -0.18
SNRPA-201ENST00000243563 TMEM70Q9BUB7 260 aa13.9□□□□□ -0.18
SNRPA-201ENST00000243563 ST20Q9HBF5 79 aa13.9□□□□□ -0.18
SNRPA-201ENST00000243563 ESRGQ1W209 222 aa13.9□□□□□ -0.19
SNRPA-201ENST00000243563 SUMO2P61956 95 aaKnown RBP13.89□□□□□ -0.19
SNRPA-201ENST00000243563 IQCJQ1A5X6 159 aa13.89□□□□□ -0.19
SNRPA-201ENST00000243563 C3orf84H3BNL1 204 aa13.88□□□□□ -0.19
SNRPA-201ENST00000243563 LYPD5Q6UWN5 251 aa13.88□□□□□ -0.19
SNRPA-201ENST00000243563 NTM-AS1Q6ZSK4 140 aa13.88□□□□□ -0.19
SNRPA-201ENST00000243563 LOC389332A0A1B0GUA5 103 aa13.87□□□□□ -0.19
SNRPA-201ENST00000243563 IGLV2-18A0A075B6J9 118 aa13.86□□□□□ -0.19
SNRPA-201ENST00000243563 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
SNRPA-201ENST00000243563 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
SNRPA-201ENST00000243563 GTSF1LQ9H1H1 148 aa13.86□□□□□ -0.19
SNRPA-201ENST00000243563 TSHBP01222 138 aa13.85□□□□□ -0.19
SNRPA-201ENST00000243563 C18orf32Q8TCD1 76 aa13.85□□□□□ -0.19
SNRPA-201ENST00000243563 LAMTOR2Q9Y2Q5 125 aa13.85□□□□□ -0.19
SNRPA-201ENST00000243563 LINC00588Q9Y4M8 146 aa13.85□□□□□ -0.19
SNRPA-201ENST00000243563 TRBV27A0A0K0K1C4 114 aa13.84□□□□□ -0.19
SNRPA-201ENST00000243563 PRSS47A8MTI9 375 aa13.84□□□□□ -0.19
SNRPA-201ENST00000243563 PPP1R17O96001 155 aa13.84□□□□□ -0.19
SNRPA-201ENST00000243563 DAZ4Q86SG3 579 aaKnown RBP13.84□□□□□ -0.19
SNRPA-201ENST00000243563 DAZ3Q9NR90 486 aaKnown RBP13.84□□□□□ -0.19
SNRPA-201ENST00000243563 URB1-AS1Q96HZ7 61 aa13.83□□□□□ -0.2
SNRPA-201ENST00000243563 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
SNRPA-201ENST00000243563 DNAH1Q9P2D7 4330 aa13.83□□□□□ -0.2
SNRPA-201ENST00000243563 I3L3M4 83 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 IFI27P40305 119 aaPredicted RBP13.82□□□□□ -0.2
SNRPA-201ENST00000243563 RPL32P62910 135 aaKnown RBP13.82□□□□□ -0.2
SNRPA-201ENST00000243563 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 TCAPO15273 167 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 PMCHP20382 165 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 TCTAP57738 103 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 SH2D6Q7Z4S9 175 aa13.82□□□□□ -0.2
SNRPA-201ENST00000243563 VCYO14598 125 aa13.81□□□□□ -0.2
SNRPA-201ENST00000243563 ALMS1Q8TCU4 4167 aa13.8□□□□□ -0.2
SNRPA-201ENST00000243563 TRBV6-8A0A0A6YYG3 113 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 TIRAPP58753 221 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 COTL1Q14019 142 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 Q8N3U1 123 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 Q8N8P6 123 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BKO60814 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BJP06899 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BOP23527 126 aa13.78□□□□□ -0.2
SNRPA-201ENST00000243563 HIST1H2BBP33778 126 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms