RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FAM215AQ9Y5M1 114 aa5.81□□□□□ -1.48
RIF1-201ENST00000243326 TAL2Q16559 108 aa5.81□□□□□ -1.48
RIF1-201ENST00000243326 MDFICQ9P1T7 246 aa5.81□□□□□ -1.48
RIF1-201ENST00000243326 IGHV1-69DA0A0B4J2H0 117 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 IGHV1-69P01742 117 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 I3L2K1 104 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 INSL3P51460 131 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
RIF1-201ENST00000243326 Q6ZUT4 128 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 C11orf1Q9H5F2 150 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 IGKV1-17P01599 117 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 ZNF883P0CG24 379 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 RBX1P62877 108 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 TMEM61Q8N0U2 210 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 PRM2P04554 102 aa5.8□□□□□ -1.48
RIF1-201ENST00000243326 IGLV2-8P01709 118 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 LECT2O14960 151 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 GATA3P23771 443 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 ANKRD11Q6UB99 2663 aaPredicted RBP5.79□□□□□ -1.48
RIF1-201ENST00000243326 IGHV4OR15-8A0A075B7B6 117 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 A0A087WW49 117 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 LGALS9O00182 355 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 Q96MF0 132 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 K7EIM0 57 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 USMG5Q96IX5 58 aa5.79□□□□□ -1.48
RIF1-201ENST00000243326 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 Q8N1Y9 231 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 DEFB112Q30KQ8 113 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 ALPK3Q96L96 1907 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 B4DSR2 109 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 RNF5Q99942 180 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 TEX22C9J3V5 150 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 BRWD1-AS2P59051 145 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 IGLC6P0CF74 106 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 RNF152Q8N8N0 203 aa5.78□□□□□ -1.48
RIF1-201ENST00000243326 ETV2O00321 342 aaPredicted RBP5.78□□□□□ -1.48
RIF1-201ENST00000243326 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 MBD6Q96DN6 1003 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 PROK1P58294 105 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 WI2-2373I1.2A0A1W2PRP0 233 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 YPEL4Q96NS1 127 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 HIST2H2BCQ6DN03 193 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 LRCOL1A6NCL2 159 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 J3KT08 172 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 GHRHP01286 108 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 Q6ZS92 163 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
RIF1-201ENST00000243326 UNQ9165/PRO28630Q6UXU0 137 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 NDUFA4O00483 81 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 CGB3P0DN86 165 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 HERVK_113P63121 156 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 GYPEP15421 78 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 CTSGP08311 255 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 PRR4Q16378 134 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 TIMM17AQ99595 171 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 TOMM6Q96B49 74 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 MSMBP08118 114 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 C10orf105Q8TEF2 133 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 SIRPDQ9H106 197 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 IGKV1D-37A0A075B6S9 117 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 IGHV7-81A0A0B4J1V7 117 aa5.76□□□□□ -1.49
RIF1-201ENST00000243326 NDUFA11Q86Y39 141 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 ZFP36P26651 326 aaKnown RBP5.75□□□□□ -1.49
RIF1-201ENST00000243326 UBE2BP63146 152 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
RIF1-201ENST00000243326 ELANEP08246 267 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 E9PLD3 99 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 IGLV1-44P01699 117 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 DCANP1Q8TF63 244 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 OOSP1A8MZH6 123 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 ACYP1P07311 99 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 CRIP3Q6Q6R5 217 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 MGAM2Q2M2H8 2515 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 Q6ZSV7 163 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 RHOHQ15669 191 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 LINC00526Q96FQ7 95 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 TMEM131Q92545 1883 aa5.75□□□□□ -1.49
RIF1-201ENST00000243326 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 HIGD2BQ4VC39 106 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 IGHV4-61A0A0C4DH41 118 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 MIR7-3HGQ8N6C7 128 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 TMEM258P61165 79 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 LINC00311Q8N616 119 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 POU2AF1Q16633 256 aa5.74□□□□□ -1.49
RIF1-201ENST00000243326 SP5Q6BEB4 398 aaPredicted RBP5.74□□□□□ -1.49
RIF1-201ENST00000243326 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms