RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
HOXC6-201ENST00000243108 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
HOXC6-201ENST00000243108 CBY3A6NI87 242 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 MGPP08493 103 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 DDTP30046 118 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 STHQ8IWL8 128 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 INSP01308 110 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 JPT2Q9H910 190 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 PPP1R17O96001 155 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 FCER1GP30273 86 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 C20orf202A1L168 122 aa12.46□□□□□ -0.41
HOXC6-201ENST00000243108 GIG44P09565 113 aaPredicted RBP12.46□□□□□ -0.41
HOXC6-201ENST00000243108 SUMO2P61956 95 aaKnown RBP12.46□□□□□ -0.41
HOXC6-201ENST00000243108 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
HOXC6-201ENST00000243108 PTH2Q96A98 100 aa12.45□□□□□ -0.42
HOXC6-201ENST00000243108 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
HOXC6-201ENST00000243108 CRYGDP07320 174 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
HOXC6-201ENST00000243108 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 SUMO4Q6EEV6 95 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 A0A087WWL8 130 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 K7EMI3 77 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 LAGE3Q14657 143 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ATOH7Q8N100 152 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 LINC01587Q99440 93 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 KMT2AQ03164 3969 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 TRAV9-2A0A087WT02 112 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 NUTF2P61970 127 aaKnown RBP12.42□□□□□ -0.42
HOXC6-201ENST00000243108 SPATA45Q537H7 98 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 IFI27L1Q96BM0 104 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 XCL2Q9UBD3 114 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 M0R2P5 195 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 HTN1P15515 57 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 DEFB4AO15263 64 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 TCAPO15273 167 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 PRM2P04554 102 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF705AQ6ZN79 300 aaPredicted RBP12.4□□□□□ -0.42
HOXC6-201ENST00000243108 SPXQ9BT56 116 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 MAJINQ3KP22 176 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 FAM74A4Q5TZK3 123 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 LGALS9CQ6DKI2 356 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 F5H697 171 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 M0QY20 66 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
HOXC6-201ENST00000243108 CEMP1Q6PRD7 247 aaPredicted RBP12.39□□□□□ -0.43
HOXC6-201ENST00000243108 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 H0Y8G0 127 aa12.38□□□□□ -0.43
HOXC6-201ENST00000243108 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 A8MWV9 139 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 NANOS2P60321 138 aaKnown RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 ZNF56Q15929 161 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 VPS13DQ5THJ4 4388 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 ATP5LO75964 103 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 Q8NAQ8 132 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 TMEM208Q9BTX3 173 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 FRAS1Q86XX4 4008 aa12.36□□□□□ -0.43
HOXC6-201ENST00000243108 NUDT3O95989 172 aa12.36□□□□□ -0.43
HOXC6-201ENST00000243108 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
HOXC6-201ENST00000243108 AZU1P20160 251 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 X6R8D5 127 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 TRBV27A0A0K0K1C4 114 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 VCYO14598 125 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
HOXC6-201ENST00000243108 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 hDV102S1A0JD36 115 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 UQCR10Q9UDW1 63 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
HOXC6-201ENST00000243108 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
HOXC6-201ENST00000243108 NACAE9PAV3 2078 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 HSBP1L1C9JCN9 74 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 H7C1H1 209 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms