RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 IGIPA6NJ69 53 aa12.46□□□□□ -0.41
SSPN-201ENST00000242729 K7EMT4 169 aa12.46□□□□□ -0.41
SSPN-201ENST00000242729 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
SSPN-201ENST00000242729 E9PLD3 99 aa12.46□□□□□ -0.42
SSPN-201ENST00000242729 K7EQG2 157 aa12.46□□□□□ -0.42
SSPN-201ENST00000242729 VCYO14598 125 aa12.46□□□□□ -0.42
SSPN-201ENST00000242729 TCTEX1D4Q5JR98 221 aa12.46□□□□□ -0.42
SSPN-201ENST00000242729 ZNF580Q9UK33 172 aa12.46□□□□□ -0.42
SSPN-201ENST00000242729 G3V4G9 280 aa12.45□□□□□ -0.42
SSPN-201ENST00000242729 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
SSPN-201ENST00000242729 IGHV1OR15-1A0A075B7D0 117 aa12.45□□□□□ -0.42
SSPN-201ENST00000242729 DEFB131AP59861 70 aa12.45□□□□□ -0.42
SSPN-201ENST00000242729 MRPL16Q9NX20 251 aaKnown RBP12.45□□□□□ -0.42
SSPN-201ENST00000242729 LOC107984156A0A0G2JMH3 177 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 NXPH4O95158 308 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 MED14OSP0DP75 135 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 ARL17AQ8IVW1 177 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 M0QY20 66 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 PMVKQ15126 192 aa12.44□□□□□ -0.42
SSPN-201ENST00000242729 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
SSPN-201ENST00000242729 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
SSPN-201ENST00000242729 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
SSPN-201ENST00000242729 INSL3P51460 131 aa12.42□□□□□ -0.42
SSPN-201ENST00000242729 SETXQ7Z333 2677 aaKnown RBP12.42□□□□□ -0.42
SSPN-201ENST00000242729 BRI3O95415 125 aa12.42□□□□□ -0.42
SSPN-201ENST00000242729 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
SSPN-201ENST00000242729 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
SSPN-201ENST00000242729 VPREB3Q9UKI3 123 aa12.42□□□□□ -0.42
SSPN-201ENST00000242729 PPP1R17O96001 155 aa12.41□□□□□ -0.42
SSPN-201ENST00000242729 ZNF702PQ9H963 129 aa12.41□□□□□ -0.42
SSPN-201ENST00000242729 COX6B1P14854 86 aa12.41□□□□□ -0.42
SSPN-201ENST00000242729 H7C2G1 150 aa12.41□□□□□ -0.42
SSPN-201ENST00000242729 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
SSPN-201ENST00000242729 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 A0A0J9YXV3 536 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 LGALS9O00182 355 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 ZNF418Q8TF45 676 aaPredicted RBP12.39□□□□□ -0.43
SSPN-201ENST00000242729 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 A0A096LNT2 108 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 TRBV27A0A0K0K1C4 114 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
SSPN-201ENST00000242729 PSMB2P49721 201 aa12.38□□□□□ -0.43
SSPN-201ENST00000242729 TAL2Q16559 108 aa12.38□□□□□ -0.43
SSPN-201ENST00000242729 TENM4Q6N022 2769 aa12.38□□□□□ -0.43
SSPN-201ENST00000242729 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
SSPN-201ENST00000242729 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
SSPN-201ENST00000242729 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
SSPN-201ENST00000242729 Q6ZSN1 163 aa12.38□□□□□ -0.43
SSPN-201ENST00000242729 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
SSPN-201ENST00000242729 A0A0J9YY99 117 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 GATA3P23771 443 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 HERVK_113P61574 105 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 SPAG8Q99932 426 aaPredicted RBP12.37□□□□□ -0.43
SSPN-201ENST00000242729 SPXQ9BT56 116 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 ITPR2Q14571 2701 aa12.37□□□□□ -0.43
SSPN-201ENST00000242729 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
SSPN-201ENST00000242729 PTH2Q96A98 100 aa12.36□□□□□ -0.43
SSPN-201ENST00000242729 A8MZ25 164 aa12.36□□□□□ -0.43
SSPN-201ENST00000242729 J3QQQ9 107 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 TSPAN13O95857 204 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 HIST2H2BCQ6DN03 193 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 A0A1B0GWB2 263 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 Q6YL49 198 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 TRPT1Q86TN4 253 aaKnown RBP12.35□□□□□ -0.43
SSPN-201ENST00000242729 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
SSPN-201ENST00000242729 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
SSPN-201ENST00000242729 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
SSPN-201ENST00000242729 LGALS3P17931 250 aaKnown RBP12.35□□□□□ -0.43
SSPN-201ENST00000242729 NPC2P61916 151 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 Q5PR19 223 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
SSPN-201ENST00000242729 TMEM141Q96I45 108 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 UBE2E2Q96LR5 201 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 NBEAL2Q6ZNJ1 2754 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 CR1P17927 2039 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 DSCR9P59020 149 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 Q96MF0 132 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
SSPN-201ENST00000242729 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.44
SSPN-201ENST00000242729 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.44
SSPN-201ENST00000242729 CD28P10747 220 aa12.33□□□□□ -0.44
SSPN-201ENST00000242729 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
SSPN-201ENST00000242729 VCX2Q9H322 139 aa12.33□□□□□ -0.44
SSPN-201ENST00000242729 I3L3M4 83 aa12.33□□□□□ -0.44
SSPN-201ENST00000242729 LINC01587Q99440 93 aa12.32□□□□□ -0.44
SSPN-201ENST00000242729 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
SSPN-201ENST00000242729 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
SSPN-201ENST00000242729 ELANEP08246 267 aa12.32□□□□□ -0.44
SSPN-201ENST00000242729 SMAGPQ0VAQ4 97 aa12.32□□□□□ -0.44
SSPN-201ENST00000242729 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
SSPN-201ENST00000242729 TRBV6-5A0A0K0K1A5 114 aa12.31□□□□□ -0.44
SSPN-201ENST00000242729 H3BMM0 161 aa12.31□□□□□ -0.44
SSPN-201ENST00000242729 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms