RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ZNF580Q9UK33 172 aa2.76□□□□□ -1.97
UFM1-201ENST00000239878 HLA-DRB4X5D2U9 266 aa2.76□□□□□ -1.97
UFM1-201ENST00000239878 TMEM30CPA0ZSE6 113 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 C12orf77C9JDV5 145 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 NPYP01303 97 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 KLK9Q2XQG4 91 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 ZNF833PQ6ZTB9 187 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 IFI27L1Q96BM0 104 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 MAP6D1Q9H9H5 199 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 PLEKHA3Q9HB20 300 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 KLK9Q9UKQ9 250 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.75□□□□□ -1.972e-10■■■■■ 37.6
UFM1-201ENST00000239878 IGKCP01834 107 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 TRACP01848 142 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 CCL3L1P16619 93 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 ZNF22P17026 224 aaPredicted RBP2.75□□□□□ -1.97
UFM1-201ENST00000239878 RPL13AP40429 203 aaKnown RBP2.75□□□□□ -1.97
UFM1-201ENST00000239878 MRGPRG-AS1Q2M3A8 158 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 MINOS1Q5TGZ0 78 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 GOLT1AQ6ZVE7 132 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 ZNF714Q96N38 554 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 C16orf95Q9H693 158 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 MINOS1-NBL1R4GNA1 71 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 FN1P02751 2386 aaKnown RBP2.75□□□□□ -1.97
UFM1-201ENST00000239878 TRAV13-1A0A0B4J241 112 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 PIGBOS1A0A0B4J2F0 54 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 LGALS9O00182 355 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 PROP1O75360 226 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 TMEM258P61165 79 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 PSMG4Q5JS54 123 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 LYRM7Q5U5X0 104 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 C17orf77Q96MU5 243 aa2.75□□□□□ -1.97
UFM1-201ENST00000239878 A6NDX4 124 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 UBE2D1P51668 147 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
UFM1-201ENST00000239878 RIGQ13278 110 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 FAM53AQ6NSI3 398 aaPredicted RBP2.74□□□□□ -1.97
UFM1-201ENST00000239878 NXT2Q9NPJ8 142 aaKnown RBP2.74□□□□□ -1.97
UFM1-201ENST00000239878 BUB1B-PAK6H3BSN5 160 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 PEX7O00628 323 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 HOXD3P31249 432 aaPredicted RBP2.74□□□□□ -1.97
UFM1-201ENST00000239878 SAA4P35542 130 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 DLX1P56177 255 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 Q6ZSN1 163 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 DRAM1Q8N682 238 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 SHANK2-AS3Q9BTD1 123 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 AGPAT4-IT1Q9H0P7 198 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
UFM1-201ENST00000239878 DNAJC9-AS1A6NH13 148 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 HBDP02042 147 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 HERVK_113P61574 105 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 ERVK-16P61578 105 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 DEFB112Q30KQ8 113 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 RUSC1-AS1Q66K80 236 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 PDPNQ86YL7 162 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 OVOL2Q9BRP0 275 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
UFM1-201ENST00000239878 TP53TG1Q9Y2A0 90 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 MALRD1Q5VYJ5 2156 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 TRAV40A0A0B4J280 105 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 LINC00473A8K010 186 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 HLA-DMBP28068 263 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 SPATA3Q8NHX4 192 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 SMCR5Q8TEV8 140 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 UPK3BQ9BT76 320 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 ZNF256Q9Y2P7 627 aaPredicted RBP2.73□□□□□ -1.97
UFM1-201ENST00000239878 H3BMM0 161 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 H7C1H1 209 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 NDUFA3O95167 84 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 IGLV2-23P01705 113 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 P0C879 139 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 KRTAP24-1Q3LI83 254 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 NDUFA11Q86Y39 141 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 NPBQ8NG41 125 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 UBALD1Q8TB05 177 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 MYOZ3Q8TDC0 251 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 UBE2WQ96B02 151 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 MRPL20Q9BYC9 149 aaKnown RBP2.73□□□□□ -1.97
UFM1-201ENST00000239878 AKAP6Q13023 2319 aa2.73□□□□□ -1.97
UFM1-201ENST00000239878 USF3Q68DE3 2245 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 D6R8Y8 96 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 LGALS1P09382 135 aaKnown RBP2.72□□□□□ -1.97
UFM1-201ENST00000239878 ARMS2P0C7Q2 107 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 KRTAP10-3P60369 221 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 MORN5Q5VZ52 161 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 PLEKHB2Q96CS7 222 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 PRSS22Q9GZN4 317 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 TET2Q6N021 2002 aaPredicted RBP2.72□□□□□ -1.97
UFM1-201ENST00000239878 MED13LQ71F56 2210 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 EGR2P11161 476 aaPredicted RBP2.72□□□□□ -1.97
UFM1-201ENST00000239878 PIK3CD-AS1Q5SR53 167 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 TMEM167BQ9NRX6 74 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 C11orf21Q9P2W6 132 aa2.72□□□□□ -1.97
UFM1-201ENST00000239878 AMMECR1Q9Y4X0 333 aaPredicted RBP2.72□□□□□ -1.97
UFM1-201ENST00000239878 ROS1P08922 2347 aa2.71□□□□□ -1.97
UFM1-201ENST00000239878 F8P00451 2351 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms