RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 JPT2Q9H910 190 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 GYPEP15421 78 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 SMAGPQ0VAQ4 97 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 ELOBQ15370 118 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 ZNF479Q96JC4 524 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 NDUFAF3Q9BU61 184 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 C5orf52A6NGY3 159 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 AMMECR1LQ6DCA0 310 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 GNB1LQ9BYB4 327 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
TNFAIP3-201ENST00000237289 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 A0A096LPF7 62 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 NCR2O95944 276 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 FAM104BQ5XKR9 115 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 ERASQ7Z444 233 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 Q8NAQ8 132 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 MRAP2Q96G30 205 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 TRAV26-1A0A087WT03 109 aa7.99□□□□□ -1.13
TNFAIP3-201ENST00000237289 K7EQD1 137 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 HSBP1O75506 76 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 HINT1P49773 126 aaPredicted RBP7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 PHLDA1Q8WV24 401 aaPredicted RBP7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 TRBV24-1A0A075B6N3 115 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 D6R8Y8 96 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 ZFAND6Q6FIF0 208 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 Q6ZTC4 211 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 HOXA5P20719 270 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 RNASEKQ6P5S7 137 aaKnown RBP7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 DNLZQ5SXM8 178 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 SH2D6Q7Z4S9 175 aa7.98□□□□□ -1.13
TNFAIP3-201ENST00000237289 RS1O15537 224 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 PIK3CD-AS1Q5SR53 167 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 ZFP2Q6ZN57 461 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 CCL18P55774 89 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 CTAG1AP78358 180 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 TRAV26-2A0A0B4J265 109 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 SMKR1H3BMG3 65 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 CELA1Q9UNI1 258 aa7.97□□□□□ -1.13
TNFAIP3-201ENST00000237289 TRAV8-6A0A0B4J262 113 aa7.96□□□□□ -1.13
TNFAIP3-201ENST00000237289 COL5A1-AS1Q5SY13 56 aa7.96□□□□□ -1.13
TNFAIP3-201ENST00000237289 NUPR2A6NF83 97 aa7.96□□□□□ -1.13
TNFAIP3-201ENST00000237289 ATOH7Q8N100 152 aa7.96□□□□□ -1.13
TNFAIP3-201ENST00000237289 TCTAP57738 103 aa7.96□□□□□ -1.14
TNFAIP3-201ENST00000237289 VCYO14598 125 aa7.96□□□□□ -1.14
TNFAIP3-201ENST00000237289 MRPL51Q4U2R6 128 aaKnown RBP7.96□□□□□ -1.14
TNFAIP3-201ENST00000237289 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
TNFAIP3-201ENST00000237289 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
TNFAIP3-201ENST00000237289 A0A087WX48 190 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BKO60814 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BJP06899 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BOP23527 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BBP33778 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BDP58876 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BCP62807 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST2H2BEQ16778 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 GTF2H5Q6ZYL4 71 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BHQ93079 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BNQ99877 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BMQ99879 126 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
TNFAIP3-201ENST00000237289 TRBV10-1A0A0K0K1A3 114 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 SCRT2Q9NQ03 307 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 IGHV3-38A0A0C4DH36 116 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 SDHAF1A6NFY7 115 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 BTF3P20290 206 aaKnown RBP7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 TRBV6-4A0A1B0GX49 114 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 WWC2-AS2Q96NR7 200 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 TRBV7-3A0A075B6L6 115 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 DEFB104AQ8WTQ1 72 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 TMEM101Q96IK0 257 aa7.94□□□□□ -1.14
TNFAIP3-201ENST00000237289 SLC25A29Q8N8R3 303 aa7.93□□□□□ -1.14
TNFAIP3-201ENST00000237289 PTH2Q96A98 100 aa7.93□□□□□ -1.14
TNFAIP3-201ENST00000237289 NXT2Q9NPJ8 142 aaKnown RBP7.93□□□□□ -1.14
TNFAIP3-201ENST00000237289 IGHV4-4A0A075B6R2 117 aa7.93□□□□□ -1.14
TNFAIP3-201ENST00000237289 SUMO2P61956 95 aaKnown RBP7.93□□□□□ -1.14
TNFAIP3-201ENST00000237289 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
TNFAIP3-201ENST00000237289 TRBV25-1A0A075B6N4 114 aa7.92□□□□□ -1.14
TNFAIP3-201ENST00000237289 I3L3M4 83 aa7.92□□□□□ -1.14
TNFAIP3-201ENST00000237289 CRYGDP07320 174 aa7.92□□□□□ -1.14
TNFAIP3-201ENST00000237289 CNFNQ9BYD5 112 aa7.92□□□□□ -1.14
TNFAIP3-201ENST00000237289 DAZ4Q86SG3 579 aaKnown RBP7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 DAZ3Q9NR90 486 aaKnown RBP7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 HIST1H2BLQ99880 126 aa7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 GATA1P15976 413 aaPredicted RBP7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 RPL39LQ96EH5 51 aaKnown RBP7.91□□□□□ -1.14
TNFAIP3-201ENST00000237289 ORMDL2Q53FV1 153 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms