RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 FRZBQ92765 325 aa7.05□□□□□ -1.28
HMGCL-201ENST00000235958 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
HMGCL-201ENST00000235958 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
HMGCL-201ENST00000235958 TRBV24-1A0A075B6N3 115 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 TGIF2-C20orf24A0A0A6YYL0 155 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 ATP6V1G1O75348 118 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 S100A1P23297 94 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 SRIP30626 198 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
HMGCL-201ENST00000235958 LYPD5Q6UWN5 251 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 SH2D6Q7Z4S9 175 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 NEXN-AS1Q8NBZ9 246 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 ATP6V0E2Q8NHE4 81 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
HMGCL-201ENST00000235958 MRAP2Q96G30 205 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 YPEL4Q96NS1 127 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 TNFRSF18Q9Y5U5 241 aa7.04□□□□□ -1.28
HMGCL-201ENST00000235958 SMKR1H3BMG3 65 aa7.03□□□□□ -1.28
HMGCL-201ENST00000235958 CKS2P33552 79 aa7.03□□□□□ -1.28
HMGCL-201ENST00000235958 TMEM136Q6ZRR5 245 aa7.03□□□□□ -1.28
HMGCL-201ENST00000235958 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
HMGCL-201ENST00000235958 GNB1LQ9BYB4 327 aa7.03□□□□□ -1.28
HMGCL-201ENST00000235958 LINC00694P0DN24 101 aa7.02□□□□□ -1.29
HMGCL-201ENST00000235958 RPS10P46783 165 aaKnown RBP7.02□□□□□ -1.29
HMGCL-201ENST00000235958 CCL18P55774 89 aa7.02□□□□□ -1.29
HMGCL-201ENST00000235958 UBE2D3P61077 147 aa7.02□□□□□ -1.29
HMGCL-201ENST00000235958 UBE2D2P62837 147 aa7.02□□□□□ -1.29
HMGCL-201ENST00000235958 COX19Q49B96 90 aa7.02□□□□□ -1.29
HMGCL-201ENST00000235958 SCO1O75880 301 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 NCR2O95944 276 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 APCSP02743 223 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 PPBPP02775 128 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 NRACQ8N912 160 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 GTSF1LQ9H1H1 148 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 LINC00588Q9Y4M8 146 aa7.01□□□□□ -1.29
HMGCL-201ENST00000235958 IGHV3-38A0A0C4DH36 116 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 D6R8Y8 96 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 PPP1R17O96001 155 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 HLA-DQA1P01909 254 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 KIAA1644Q3SXP7 199 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 OR10J3Q5JRS4 329 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 DAZ4Q86SG3 579 aaKnown RBP7□□□□□ -1.29
HMGCL-201ENST00000235958 ORMDL3Q8N138 153 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 ST20Q9HBF5 79 aa7□□□□□ -1.29
HMGCL-201ENST00000235958 DAZ3Q9NR90 486 aaKnown RBP7□□□□□ -1.29
HMGCL-201ENST00000235958 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 COLCA2A8K830 154 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 TNFRSF6BO95407 300 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 LY6G6CO95867 125 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 POLR2KP53803 58 aaKnown RBP6.99□□□□□ -1.29
HMGCL-201ENST00000235958 TIRAPP58753 221 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 FABP9Q0Z7S8 132 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.99□□□□□ -1.29
HMGCL-201ENST00000235958 DEFB104AQ8WTQ1 72 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 PRELID3AQ96N28 172 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
HMGCL-201ENST00000235958 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
HMGCL-201ENST00000235958 VCYO14598 125 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 NPYP01303 97 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 MT-ND6P03923 174 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 PMCHP20382 165 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 SUMO2P61956 95 aaKnown RBP6.98□□□□□ -1.29
HMGCL-201ENST00000235958 NTM-AS1Q6ZSK4 140 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 C20orf78Q9BR46 151 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 TMEM70Q9BUB7 260 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 STARD9Q9P2P6 4700 aa6.98□□□□□ -1.29
HMGCL-201ENST00000235958 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 I3L3M4 83 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 PHOX2AO14813 284 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 LELP1Q5T871 98 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 Q9H8V8 135 aa6.97□□□□□ -1.29
HMGCL-201ENST00000235958 MRPS16Q9Y3D3 137 aaKnown RBP6.97□□□□□ -1.29
HMGCL-201ENST00000235958 TRAV8-6A0A0B4J262 113 aa6.96□□□□□ -1.3
HMGCL-201ENST00000235958 TRBV27A0A0K0K1C4 114 aa6.96□□□□□ -1.3
HMGCL-201ENST00000235958 PRSS47A8MTI9 375 aa6.96□□□□□ -1.3
HMGCL-201ENST00000235958 TMEM97Q5BJF2 176 aa6.96□□□□□ -1.3
HMGCL-201ENST00000235958 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.3
HMGCL-201ENST00000235958 LAMTOR2Q9Y2Q5 125 aa6.96□□□□□ -1.3
HMGCL-201ENST00000235958 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
HMGCL-201ENST00000235958 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
HMGCL-201ENST00000235958 LOC389332A0A1B0GUA5 103 aa6.95□□□□□ -1.3
HMGCL-201ENST00000235958 RAB5AP20339 215 aa6.95□□□□□ -1.3
HMGCL-201ENST00000235958 RPL32P62910 135 aaKnown RBP6.95□□□□□ -1.3
HMGCL-201ENST00000235958 COTL1Q14019 142 aa6.95□□□□□ -1.3
HMGCL-201ENST00000235958 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
HMGCL-201ENST00000235958 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
HMGCL-201ENST00000235958 TRBV25-1A0A075B6N4 114 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 LCE6AA0A183 80 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 SIVA1O15304 175 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 TSHBP01222 138 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 TRGC2P03986 189 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 IQCJQ1A5X6 159 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 WFDC10BQ8IUB3 73 aa6.94□□□□□ -1.3
HMGCL-201ENST00000235958 MAP1LC3AQ9H492 121 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms