RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 ADAMTSL4-AS1Q5T5F5 129 aa12.57□□□□□ -0.4
RAB35-201ENST00000229340 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
RAB35-201ENST00000229340 YAE1D1Q9NRH1 226 aa12.57□□□□□ -0.4
RAB35-201ENST00000229340 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
RAB35-201ENST00000229340 A8MZ25 164 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 DEFB124Q8NES8 71 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 LINC01560Q8TB33 94 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 UNQ9165/PRO28630Q6UXU0 137 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 EEF1AKMT3Q96AZ1 226 aa12.56□□□□□ -0.4
RAB35-201ENST00000229340 LINC00694P0DN24 101 aa12.55□□□□□ -0.4
RAB35-201ENST00000229340 RNASE13Q5GAN3 156 aaKnown RBP12.55□□□□□ -0.4
RAB35-201ENST00000229340 LOC107984640A0A0U1RRK4 108 aa12.55□□□□□ -0.4
RAB35-201ENST00000229340 C9orf139Q6ZV77 190 aa12.55□□□□□ -0.4
RAB35-201ENST00000229340 COL12A1Q99715 3063 aa12.55□□□□□ -0.4
RAB35-201ENST00000229340 OOSP1A8MZH6 123 aa12.55□□□□□ -0.4
RAB35-201ENST00000229340 IGHV4OR15-8A0A075B7B6 117 aa12.54□□□□□ -0.4
RAB35-201ENST00000229340 A0A087WW49 117 aa12.54□□□□□ -0.4
RAB35-201ENST00000229340 TRBV12-3P01733 135 aa12.54□□□□□ -0.4
RAB35-201ENST00000229340 CD3EP07766 207 aa12.54□□□□□ -0.4
RAB35-201ENST00000229340 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
RAB35-201ENST00000229340 DAND5Q8N907 189 aa12.54□□□□□ -0.4
RAB35-201ENST00000229340 IGHV3-30-3P0DP02 117 aa12.53□□□□□ -0.4
RAB35-201ENST00000229340 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
RAB35-201ENST00000229340 MAP1AP78559 2803 aaPredicted RBP12.53□□□□□ -0.4
RAB35-201ENST00000229340 U3KQE9 123 aa12.53□□□□□ -0.4
RAB35-201ENST00000229340 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
RAB35-201ENST00000229340 LITAFQ99732 161 aa12.52□□□□□ -0.41
RAB35-201ENST00000229340 I3L3M4 83 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 DUX5Q96PT3 197 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 COX6CP09669 75 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 TRBV27A0A0K0K1C4 114 aa12.51□□□□□ -0.41
RAB35-201ENST00000229340 CHD8Q9HCK8 2581 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.418e-10■■■■□ 20.2
RAB35-201ENST00000229340 H3BT86 120 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 OVOL1O14753 267 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 IGFL3Q6UXB1 125 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
RAB35-201ENST00000229340 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
RAB35-201ENST00000229340 TMEM219Q86XT9 240 aa12.49□□□□□ -0.41
RAB35-201ENST00000229340 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
RAB35-201ENST00000229340 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
RAB35-201ENST00000229340 IGF2RP11717 2491 aa12.49□□□□□ -0.41
RAB35-201ENST00000229340 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 TRBV7-7A0A0K0K1E9 115 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 EBI3Q14213 229 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 M0R1W7 72 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 LST1O00453 97 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 IGHV3-11P01762 117 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 ATP5J2P56134 94 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 SMCR5Q8TEV8 140 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 TRBV7-1A0A0A6YYK4 115 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 LINC01600Q96MT4 127 aa12.48□□□□□ -0.41
RAB35-201ENST00000229340 ZFP36P26651 326 aaKnown RBP12.47□□□□□ -0.41
RAB35-201ENST00000229340 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
RAB35-201ENST00000229340 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
RAB35-201ENST00000229340 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
RAB35-201ENST00000229340 NXPH4O95158 308 aa12.47□□□□□ -0.41
RAB35-201ENST00000229340 SOCS3O14543 225 aa12.46□□□□□ -0.41
RAB35-201ENST00000229340 IGHV1-69P01742 117 aa12.46□□□□□ -0.41
RAB35-201ENST00000229340 C20orf203Q8NBC4 194 aa12.46□□□□□ -0.41
RAB35-201ENST00000229340 A0A0U1RRA0 63 aa12.46□□□□□ -0.42
RAB35-201ENST00000229340 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 M0QY20 66 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 EDN2P20800 178 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 FAM240AA0A1B0GVK7 77 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 MINOS1Q5TGZ0 78 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 SPANXA1Q9NS26 97 aa12.45□□□□□ -0.42
RAB35-201ENST00000229340 CSDC2Q9Y534 153 aaKnown RBP12.45□□□□□ -0.42
RAB35-201ENST00000229340 CD28P10747 220 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 HERVK_113P63121 156 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 PTPRQQ9UMZ3 2332 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 TRAV41A0A0B4J266 112 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 A0A0J9YX75 114 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 NDUFA7O95182 113 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
RAB35-201ENST00000229340 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
RAB35-201ENST00000229340 MIAQ16674 131 aa12.43□□□□□ -0.42
RAB35-201ENST00000229340 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
RAB35-201ENST00000229340 SAA4P35542 130 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 NRGNQ92686 78 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 DOPEY2Q9Y3R5 2298 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 TRBV6-5A0A0K0K1A5 114 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 NPFFO15130 113 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
RAB35-201ENST00000229340 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
RAB35-201ENST00000229340 RS1O15537 224 aa12.41□□□□□ -0.42
RAB35-201ENST00000229340 MINOS1-NBL1R4GNA1 71 aa12.41□□□□□ -0.42
RAB35-201ENST00000229340 RHOHQ15669 191 aa12.41□□□□□ -0.42
RAB35-201ENST00000229340 ZNF625Q96I27 306 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms