RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 XCL1P47992 114 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 LINC00574Q9H8X3 128 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 C14orf132Q9NPU4 83 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 TRIAP1O43715 76 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 NDUFA7O95182 113 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
HCFC2-201ENST00000229330 Q8N9W7 124 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 DYSFO75923 2080 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 TMEM131Q92545 1883 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 PRB1P04280 392 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
HCFC2-201ENST00000229330 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
HCFC2-201ENST00000229330 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
HCFC2-201ENST00000229330 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 BRK1Q8WUW1 75 aa10.53□□□□□ -0.72
HCFC2-201ENST00000229330 CDK2AP2O75956 126 aa10.52□□□□□ -0.72
HCFC2-201ENST00000229330 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 NKAPP1Q8N9T2 125 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 PCDH15Q96QU1 1955 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 DSCAML1Q8TD84 2053 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 DEFB1P60022 68 aa10.52□□□□□ -0.73
HCFC2-201ENST00000229330 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 SEM1Q6ZVN7 128 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 AJUBAQ96IF1 538 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 IMUPQ9GZP8 106 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 Q96MF0 132 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 IGHV3-30P01768 117 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 IGHV3-30-5P0DP03 117 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 WISP2O76076 250 aa10.51□□□□□ -0.73
HCFC2-201ENST00000229330 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
HCFC2-201ENST00000229330 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
HCFC2-201ENST00000229330 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
HCFC2-201ENST00000229330 ELANEP08246 267 aa10.5□□□□□ -0.73
HCFC2-201ENST00000229330 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
HCFC2-201ENST00000229330 NOP10Q9NPE3 64 aaKnown RBP10.5□□□□□ -0.73
HCFC2-201ENST00000229330 K7EQD1 137 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
HCFC2-201ENST00000229330 HIST2H2BDQ6DRA6 164 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 RNF152Q8N8N0 203 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 FAM236DA0A1B0GTK5 79 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 FAM236CP0DP71 79 aa10.49□□□□□ -0.73
HCFC2-201ENST00000229330 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
HCFC2-201ENST00000229330 TMEM256-PLSCR3K7ERE1 68 aa10.48□□□□□ -0.73
HCFC2-201ENST00000229330 Q6Q795 121 aa10.48□□□□□ -0.73
HCFC2-201ENST00000229330 TNCP24821 2201 aa10.48□□□□□ -0.73
HCFC2-201ENST00000229330 H3BQ85 93 aa10.48□□□□□ -0.73
HCFC2-201ENST00000229330 MED12LQ86YW9 2145 aa10.47□□□□□ -0.73
HCFC2-201ENST00000229330 DAD1P61803 113 aa10.47□□□□□ -0.73
HCFC2-201ENST00000229330 F5H768 121 aa10.46□□□□□ -0.73
HCFC2-201ENST00000229330 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
HCFC2-201ENST00000229330 A0A096LPF7 62 aa10.46□□□□□ -0.73
HCFC2-201ENST00000229330 J3QKU1 62 aa10.46□□□□□ -0.73
HCFC2-201ENST00000229330 DAZAP2Q15038 168 aaPredicted RBP10.46□□□□□ -0.74
HCFC2-201ENST00000229330 C5orf56Q8N8D9 126 aa10.46□□□□□ -0.74
HCFC2-201ENST00000229330 ACACBO00763 2458 aa10.46□□□□□ -0.74
HCFC2-201ENST00000229330 J3QLI3 93 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 ADORA2A-AS1P86434 159 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 NRACQ8N912 160 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 SVIPQ8NHG7 77 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 LRRC75A-AS1Q8N1F1 130 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 NREPQ16612 68 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 K7EMT4 169 aa10.45□□□□□ -0.74
HCFC2-201ENST00000229330 OTOGLQ3ZCN5 2332 aa10.44□□□□□ -0.74
HCFC2-201ENST00000229330 PTPRQQ9UMZ3 2332 aa10.44□□□□□ -0.74
HCFC2-201ENST00000229330 FUSP35637 526 aaKnown RBP eCLIP10.44□□□□□ -0.74
HCFC2-201ENST00000229330 COX7CP15954 63 aa10.44□□□□□ -0.74
HCFC2-201ENST00000229330 SPG11Q96JI7 2443 aa10.44□□□□□ -0.74
HCFC2-201ENST00000229330 SERP2Q8N6R1 65 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 IGLV4-3A0A075B6K6 122 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 M0QXV9 152 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 NUP210LQ5VU65 1888 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 UNQ9165/PRO28630Q6UXU0 137 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
HCFC2-201ENST00000229330 WFDC9Q8NEX5 89 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 LST1O00453 97 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 Q8NA96 180 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 ANKHD1Q8IWZ3 2542 aaKnown RBP10.42□□□□□ -0.74
HCFC2-201ENST00000229330 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 PDE6GP18545 87 aa10.42□□□□□ -0.74
HCFC2-201ENST00000229330 RPL18AQ02543 176 aaKnown RBP10.41□□□□□ -0.74
HCFC2-201ENST00000229330 Q6ZQT7 251 aa10.41□□□□□ -0.74
HCFC2-201ENST00000229330 Q6ZS46 218 aa10.41□□□□□ -0.74
HCFC2-201ENST00000229330 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
HCFC2-201ENST00000229330 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
HCFC2-201ENST00000229330 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
HCFC2-201ENST00000229330 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
HCFC2-201ENST00000229330 MUC22E2RYF6 1773 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms