RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PRADC1Q9BSG0 188 aa18.49■□□□□ 0.55
RUNDC3A-201ENST00000225441 FOXI2Q6ZQN5 318 aa18.48■□□□□ 0.55
RUNDC3A-201ENST00000225441 TRAV12-3A0A0B4J271 114 aa18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 TMEM238LA0A1B0GVL6 79 aa18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 A6NJY4 79 aa18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 LGALS1P09382 135 aaKnown RBP18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 RHOHQ15669 191 aa18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 ZNF479Q96JC4 524 aa18.47■□□□□ 0.55
RUNDC3A-201ENST00000225441 K7ERJ3 54 aa18.46■□□□□ 0.55
RUNDC3A-201ENST00000225441 TP53TG1Q9Y2A0 90 aa18.46■□□□□ 0.55
RUNDC3A-201ENST00000225441 NSD1Q96L73 2696 aaPredicted RBP18.46■□□□□ 0.55
RUNDC3A-201ENST00000225441 F8W1H4 67 aa18.46■□□□□ 0.55
RUNDC3A-201ENST00000225441 CRYGDP07320 174 aa18.45■□□□□ 0.54
RUNDC3A-201ENST00000225441 IGHV1OR15-1A0A075B7D0 117 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 SDHAF1A6NFY7 115 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 RRN3P1Q2M238 152 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 MUC4Q99102 2169 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 F5H697 171 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 TSHBP01222 138 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 C16orf95Q9H693 158 aa18.44■□□□□ 0.54
RUNDC3A-201ENST00000225441 SAP30O75446 220 aa18.43■□□□□ 0.54
RUNDC3A-201ENST00000225441 ZNF688P0C7X2 276 aa18.43■□□□□ 0.54
RUNDC3A-201ENST00000225441 COTL1Q14019 142 aa18.43■□□□□ 0.54
RUNDC3A-201ENST00000225441 NSUN5P1Q3KNT7 163 aa18.43■□□□□ 0.54
RUNDC3A-201ENST00000225441 TRPT1Q86TN4 253 aaKnown RBP18.43■□□□□ 0.54
RUNDC3A-201ENST00000225441 IGLV4-69A0A075B6H9 119 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 TRGV11A0A075B6L2 103 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 C11orf86A6NJI1 115 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 ZNF815PA8K554 130 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 EDN2P20800 178 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 UBE2E2Q96LR5 201 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 ZNF256Q9Y2P7 627 aaPredicted RBP18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 EDA2RQ9HAV5 297 aa18.42■□□□□ 0.54
RUNDC3A-201ENST00000225441 FN1P02751 2386 aaKnown RBP18.41■□□□□ 0.54
RUNDC3A-201ENST00000225441 M0QY20 66 aa18.41■□□□□ 0.54
RUNDC3A-201ENST00000225441 JPT2Q9H910 190 aa18.4■□□□□ 0.54
RUNDC3A-201ENST00000225441 A0A087WWL8 130 aa18.39■□□□□ 0.54
RUNDC3A-201ENST00000225441 ZNF876PQ49A33 203 aa18.39■□□□□ 0.54
RUNDC3A-201ENST00000225441 F8P00451 2351 aa18.39■□□□□ 0.53
RUNDC3A-201ENST00000225441 NDUFA7O95182 113 aa18.39■□□□□ 0.53
RUNDC3A-201ENST00000225441 C21orf62-AS1Q17RA5 79 aa18.39■□□□□ 0.53
RUNDC3A-201ENST00000225441 Q8N1Y9 231 aa18.39■□□□□ 0.53
RUNDC3A-201ENST00000225441 LINC01006Q8NI28 216 aa18.39■□□□□ 0.53
RUNDC3A-201ENST00000225441 SCGB1D4Q6XE38 83 aa18.38■□□□□ 0.53
RUNDC3A-201ENST00000225441 SPANXB1Q9NS25 103 aaPredicted RBP18.38■□□□□ 0.53
RUNDC3A-201ENST00000225441 CUBNO60494 3623 aa18.38■□□□□ 0.53
RUNDC3A-201ENST00000225441 TRAV2A0A0B4J234 112 aa18.37■□□□□ 0.53
RUNDC3A-201ENST00000225441 NFE4Q86UQ8 179 aa18.37■□□□□ 0.53
RUNDC3A-201ENST00000225441 MDFICQ9P1T7 246 aa18.37■□□□□ 0.53
RUNDC3A-201ENST00000225441 PIK3CD-AS1Q5SR53 167 aa18.36■□□□□ 0.53
RUNDC3A-201ENST00000225441 A8MTW9 85 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 UBE2D1P51668 147 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 SYNJ2BPP57105 145 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 ZNF56Q15929 161 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 TCTEX1D4Q5JR98 221 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 AMTNQ6UX39 209 aa18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 CD300EQ496F6 205 aaPredicted RBP18.35■□□□□ 0.53
RUNDC3A-201ENST00000225441 J3QR89 54 aa18.34■□□□□ 0.53
RUNDC3A-201ENST00000225441 SRSF9Q13242 221 aaKnown RBP eCLIP18.34■□□□□ 0.53
RUNDC3A-201ENST00000225441 NF1P21359 2839 aa18.34■□□□□ 0.53
RUNDC3A-201ENST00000225441 I3L3M4 83 aa18.33■□□□□ 0.53
RUNDC3A-201ENST00000225441 HOXD3P31249 432 aaPredicted RBP18.33■□□□□ 0.53
RUNDC3A-201ENST00000225441 MORN3Q6PF18 240 aaPredicted RBP18.33■□□□□ 0.53
RUNDC3A-201ENST00000225441 RPL39P62891 51 aaKnown RBP18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 SPINK13Q1W4C9 94 aa18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 FAM74A4Q5TZK3 123 aa18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 WFDC12Q8WWY7 111 aa18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 PTH2Q96A98 100 aa18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 SELENOKQ9Y6D0 94 aa18.33■□□□□ 0.52
RUNDC3A-201ENST00000225441 TRAV12-2A0A075B6T6 113 aa18.32■□□□□ 0.52
RUNDC3A-201ENST00000225441 A0A0J9YY99 117 aa18.32■□□□□ 0.52
RUNDC3A-201ENST00000225441 LYRM7Q5U5X0 104 aa18.32■□□□□ 0.52
RUNDC3A-201ENST00000225441 CRYBA4P53673 196 aa18.31■□□□□ 0.52
RUNDC3A-201ENST00000225441 AGRNO00468 2067 aa18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 RPL24P83731 157 aaKnown RBP18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 GAGE13Q4V321 117 aa18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 C20orf203Q8NBC4 194 aa18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 SLC25A29Q8N8R3 303 aa18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 PLEKHB2Q96CS7 222 aa18.3■□□□□ 0.52
RUNDC3A-201ENST00000225441 IGKV3-20P01619 116 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 KHDC1LQ5JSQ8 128 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 TMEM170BQ5T4T1 132 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 C18orf65Q6ZTR6 163 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 PYGO1Q9Y3Y4 419 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 LEPROTO15243 131 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 PROK1P58294 105 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 ZNRF2Q8NHG8 242 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 C4orf3Q8WVX3 66 aa18.28■□□□□ 0.52
RUNDC3A-201ENST00000225441 TEX48A0A1B0GUV7 120 aa18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 CD28P10747 220 aa18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 KLHL30-AS1Q8NEE0 82 aa18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 SPAG8Q99932 426 aaPredicted RBP18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 MRPL16Q9NX20 251 aaKnown RBP18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 PGPEP1Q9NXJ5 209 aa18.27■□□□□ 0.52
RUNDC3A-201ENST00000225441 J3QQQ9 107 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 PRO0461Q9UI25 63 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 H3BMG7 143 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 P0DMU3 169 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 FAM231AP0DMU4 169 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 FAM231CP0DMU5 169 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms