RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 ACANP16112 2415 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 DLX4Q92988 240 aaPredicted RBP11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 INSP01308 110 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
UBE2D4-201ENST00000222402 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
UBE2D4-201ENST00000222402 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
UBE2D4-201ENST00000222402 NPC2P61916 151 aa11.15□□□□□ -0.62
UBE2D4-201ENST00000222402 PLEKHB2Q96CS7 222 aa11.15□□□□□ -0.62
UBE2D4-201ENST00000222402 A0A0J9YXV3 536 aa11.15□□□□□ -0.63
UBE2D4-201ENST00000222402 A8MWV9 139 aa11.15□□□□□ -0.63
UBE2D4-201ENST00000222402 RHOHQ15669 191 aa11.15□□□□□ -0.63
UBE2D4-201ENST00000222402 IGKV3OR2-268A0A0C4DH90 116 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 WFDC2Q14508 124 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 CIDEAO60543 219 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 TEX29Q8N6K0 151 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
UBE2D4-201ENST00000222402 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 P0DMU3 169 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
UBE2D4-201ENST00000222402 PRSS47A8MTI9 375 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 F8W1H4 67 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 M0R2P5 195 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 FLNCQ14315 2725 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 UBE2L6O14933 153 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 PRM2P04554 102 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
UBE2D4-201ENST00000222402 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 Q6YL49 198 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 ZNF575Q86XF7 245 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 M0QY20 66 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 BRI3O95415 125 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 COX6CP09669 75 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
UBE2D4-201ENST00000222402 SPENQ96T58 3664 aaKnown RBP11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 IGKV2-29A2NJV5 120 aaPredicted RBP11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 LGALS9O00182 355 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 RHODO00212 210 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
UBE2D4-201ENST00000222402 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 ZNF702PQ9H963 129 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 SIGMAR1Q99720 223 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 FN1P02751 2386 aaKnown RBP11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 CRYGDP07320 174 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 PROK1P58294 105 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
UBE2D4-201ENST00000222402 UFSP1Q6NVU6 142 aa11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 PRO1854Q9UHT4 67 aa11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 C9orf85Q96MD7 179 aa11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 H3BMM0 161 aa11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
UBE2D4-201ENST00000222402 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 CFHR3Q02985 330 aa11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 AZU1P20160 251 aa11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 ZNF625Q96I27 306 aaPredicted RBP11.07□□□□□ -0.64
UBE2D4-201ENST00000222402 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 G3V4G9 280 aa11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 LEPROTO15243 131 aa11.06□□□□□ -0.64
UBE2D4-201ENST00000222402 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 A4D1N5 150 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 FAM19A4Q96LR4 140 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 KIF25-AS1Q9Y6Z4 181 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 TOMM7Q9P0U1 55 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 MUC4Q99102 2169 aa11.05□□□□□ -0.64
UBE2D4-201ENST00000222402 A0A0J9YY99 117 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms