RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 PRO1854Q9UHT4 67 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 TRAV2A0A0B4J234 112 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 A4D1N5 150 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 ATP5J2P56134 94 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 IGHV3-73A0A0B4J1V6 119 aa13.69□□□□□ -0.22
CACTIN-201ENST00000221899 A0A0J9YXV3 536 aa13.69□□□□□ -0.22
CACTIN-201ENST00000221899 LYRM7Q5U5X0 104 aa13.69□□□□□ -0.22
CACTIN-201ENST00000221899 IGHV1OR15-1A0A075B7D0 117 aa13.68□□□□□ -0.22
CACTIN-201ENST00000221899 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
CACTIN-201ENST00000221899 MSMBP08118 114 aa13.68□□□□□ -0.22
CACTIN-201ENST00000221899 TMEM223A0PJW6 202 aa13.68□□□□□ -0.22
CACTIN-201ENST00000221899 SNRPD3P62318 126 aaKnown RBP13.68□□□□□ -0.22
CACTIN-201ENST00000221899 MT-ATP8P03928 68 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
CACTIN-201ENST00000221899 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 TRPT1Q86TN4 253 aaKnown RBP13.67□□□□□ -0.22
CACTIN-201ENST00000221899 TEN1Q86WV5 123 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 A0A1B0GV72 72 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 ADARB2-AS1A8MUL3 147 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 IGHV4-59P01825 116 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 PSMB8P28062 276 aa13.67□□□□□ -0.22
CACTIN-201ENST00000221899 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 C20orf203Q8NBC4 194 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 A8MWV9 139 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 LEPROTO15243 131 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 CKS1BP61024 79 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 PPDPFLQ8WWR9 84 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 RHODO00212 210 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 RHOHQ15669 191 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 MUSTN1Q8IVN3 82 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 ANKRD29Q8N6D5 301 aa13.66□□□□□ -0.22
CACTIN-201ENST00000221899 TRBV20-1A0A075B6N2 111 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 RNASE13Q5GAN3 156 aaKnown RBP13.65□□□□□ -0.22
CACTIN-201ENST00000221899 IGLV4-3A0A075B6K6 122 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 I3L3M4 83 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 K7EQG2 157 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 XGP55808 180 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 PROK1P58294 105 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 CEMP1Q6PRD7 247 aaPredicted RBP13.65□□□□□ -0.22
CACTIN-201ENST00000221899 VCX2Q9H322 139 aa13.65□□□□□ -0.22
CACTIN-201ENST00000221899 PRM2P04554 102 aa13.64□□□□□ -0.23
CACTIN-201ENST00000221899 SPXQ9BT56 116 aa13.64□□□□□ -0.23
CACTIN-201ENST00000221899 CREBBPQ92793 2442 aa13.63□□□□□ -0.23
CACTIN-201ENST00000221899 DEFB112Q30KQ8 113 aa13.63□□□□□ -0.23
CACTIN-201ENST00000221899 C9JAW5 83 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 IGHV3-33P01772 117 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 Q6ZUT4 128 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
CACTIN-201ENST00000221899 ODF3Q96PU9 254 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 Q1RN00 199 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 NRGNQ92686 78 aa13.62□□□□□ -0.23
CACTIN-201ENST00000221899 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
CACTIN-201ENST00000221899 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 CRYBA4P53673 196 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
CACTIN-201ENST00000221899 BEX4Q9NWD9 120 aaPredicted RBP13.61□□□□□ -0.23
CACTIN-201ENST00000221899 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 ELANEP08246 267 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 CD28P10747 220 aa13.61□□□□□ -0.23
CACTIN-201ENST00000221899 TRAV8-3A0A0A6YYJ7 113 aa13.6□□□□□ -0.23
CACTIN-201ENST00000221899 SLC25A20O43772 301 aa13.6□□□□□ -0.23
CACTIN-201ENST00000221899 SBSPONQ8IVN8 264 aa13.6□□□□□ -0.23
CACTIN-201ENST00000221899 Q9UF83 564 aa13.6□□□□□ -0.23
CACTIN-201ENST00000221899 TCTEX1D4Q5JR98 221 aa13.6□□□□□ -0.23
CACTIN-201ENST00000221899 A0A0J9YXY3 114 aa13.59□□□□□ -0.23
CACTIN-201ENST00000221899 IGHV3-30-3P0DP02 117 aa13.59□□□□□ -0.23
CACTIN-201ENST00000221899 MAPK1IP1LQ8NDC0 245 aa13.58□□□□□ -0.24
CACTIN-201ENST00000221899 A8MZ25 164 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 B4DSR2 109 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 PRSS2P07478 247 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 NPC2P61916 151 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 FAM104AQ969W3 186 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 TIMM21Q9BVV7 248 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 TRGV11A0A075B6L2 103 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 M0R2P5 195 aa13.57□□□□□ -0.24
CACTIN-201ENST00000221899 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
CACTIN-201ENST00000221899 UTP20O75691 2785 aaKnown RBP13.57□□□□□ -0.24
CACTIN-201ENST00000221899 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
CACTIN-201ENST00000221899 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
CACTIN-201ENST00000221899 PRRC2AP48634 2157 aaKnown RBP13.55□□□□□ -0.24
CACTIN-201ENST00000221899 ZANQ9Y493 2812 aa13.55□□□□□ -0.24
CACTIN-201ENST00000221899 DEFB136Q30KP8 78 aa13.54□□□□□ -0.24
CACTIN-201ENST00000221899 Q5PR19 223 aa13.54□□□□□ -0.24
CACTIN-201ENST00000221899 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
CACTIN-201ENST00000221899 DEFB131AP59861 70 aa13.54□□□□□ -0.24
CACTIN-201ENST00000221899 ADAMTSL4-AS1Q5T5F5 129 aa13.54□□□□□ -0.24
CACTIN-201ENST00000221899 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
CACTIN-201ENST00000221899 Q6ZSN1 163 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 CLUHP3Q96NS8 147 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 FLNCQ14315 2725 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
CACTIN-201ENST00000221899 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
CACTIN-201ENST00000221899 Q6ZSV7 163 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
CACTIN-201ENST00000221899 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 LITAFQ99732 161 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 588.9 ms