RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
CNOT3-201ENST00000221232 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 M0QY20 66 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 WFDC2Q14508 124 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 PMVKQ15126 192 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 C9orf85Q96MD7 179 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 Q9UF83 564 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 APOMO95445 188 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
CNOT3-201ENST00000221232 IGHV4-31P0DP07 118 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 NACAE9PAV3 2078 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 NF1P21359 2839 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 Q6YL49 198 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 POM121L12Q8N7R1 296 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 TSPEAR-AS2P59090 65 aa10.79□□□□□ -0.68
CNOT3-201ENST00000221232 RNASE13Q5GAN3 156 aaKnown RBP10.79□□□□□ -0.68
CNOT3-201ENST00000221232 LGALS9O00182 355 aa10.78□□□□□ -0.68
CNOT3-201ENST00000221232 TEX48A0A1B0GUV7 120 aa10.78□□□□□ -0.68
CNOT3-201ENST00000221232 SMAGPQ0VAQ4 97 aa10.78□□□□□ -0.68
CNOT3-201ENST00000221232 CEMP1Q6PRD7 247 aaPredicted RBP10.78□□□□□ -0.68
CNOT3-201ENST00000221232 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
CNOT3-201ENST00000221232 GTSF1LQ9H1H1 148 aa10.78□□□□□ -0.68
CNOT3-201ENST00000221232 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 CHD6Q8TD26 2715 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 TRBV27A0A0K0K1C4 114 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 ELANEP08246 267 aa10.77□□□□□ -0.69
CNOT3-201ENST00000221232 LINC01549A6NIU2 74 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 TAL2Q16559 108 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 SAMD13Q5VXD3 122 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 MRPL16Q9NX20 251 aaKnown RBP10.76□□□□□ -0.69
CNOT3-201ENST00000221232 NBPF19A0A087WUL8 3843 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 G3V4G9 280 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 Q96MF0 132 aa10.76□□□□□ -0.69
CNOT3-201ENST00000221232 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 CRYBA4P53673 196 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 J3QLI3 93 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 HERVK_113P61574 105 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
CNOT3-201ENST00000221232 RBMY1BA6NDE4 496 aaKnown RBP10.75□□□□□ -0.69
CNOT3-201ENST00000221232 RBMY1EA6NEQ0 496 aaKnown RBP10.75□□□□□ -0.69
CNOT3-201ENST00000221232 RBMY1DP0C7P1 496 aaKnown RBP10.75□□□□□ -0.69
CNOT3-201ENST00000221232 TRPT1Q86TN4 253 aaKnown RBP10.75□□□□□ -0.69
CNOT3-201ENST00000221232 ETDBQ3ZM63 59 aa10.74□□□□□ -0.69
CNOT3-201ENST00000221232 DLX4Q92988 240 aaPredicted RBP10.74□□□□□ -0.69
CNOT3-201ENST00000221232 TMEM141Q96I45 108 aa10.74□□□□□ -0.69
CNOT3-201ENST00000221232 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
CNOT3-201ENST00000221232 IGHV3-38A0A0C4DH36 116 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 HIST2H2BCQ6DN03 193 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 Q6ZSN1 163 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 TIMM17AQ99595 171 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 C2CD3Q4AC94 2353 aa10.73□□□□□ -0.69
CNOT3-201ENST00000221232 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
CNOT3-201ENST00000221232 A0A0J9YY99 117 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 TMEM89A2RUT3 159 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 I3L3M4 83 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 H3BMM0 161 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 DYNLRB2Q8TF09 96 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 LINC01587Q99440 93 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 SPAG8Q99932 426 aaPredicted RBP10.72□□□□□ -0.69
CNOT3-201ENST00000221232 SPXQ9BT56 116 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 VCX2Q9H322 139 aa10.72□□□□□ -0.69
CNOT3-201ENST00000221232 TRGV11A0A075B6L2 103 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 J3QQQ9 107 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 LGALS3P17931 250 aaKnown RBP10.71□□□□□ -0.69
CNOT3-201ENST00000221232 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
CNOT3-201ENST00000221232 LINC01619G3V211 115 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 AZU1P20160 251 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 PSMB2P49721 201 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
CNOT3-201ENST00000221232 ACANP16112 2415 aa10.71□□□□□ -0.7
CNOT3-201ENST00000221232 H7C2G1 150 aa10.71□□□□□ -0.7
CNOT3-201ENST00000221232 GAGE13Q4V321 117 aa10.71□□□□□ -0.7
CNOT3-201ENST00000221232 CD28P10747 220 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 DEFB113Q30KQ7 82 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 ZNF843Q8N446 348 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 APCP25054 2843 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 PAPPA-AS1Q5QFB9 102 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
CNOT3-201ENST00000221232 INSL3P51460 131 aa10.69□□□□□ -0.7
CNOT3-201ENST00000221232 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
CNOT3-201ENST00000221232 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
CNOT3-201ENST00000221232 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
CNOT3-201ENST00000221232 FSHBP01225 129 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms